RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TMEM191BP0C7N4 346 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 MTHFRP42898 656 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 YWHAHQ04917 246 aaPredicted RBP14.63□□□□□ -0.07
SNF8-206ENST00000509989 ATAT1Q5SQI0 421 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 OVOS1Q6IE37 1185 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 ZNF280DQ6N043 979 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 TRAPPC11Q7Z392 1133 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 GRASPQ7Z6J2 395 aaPredicted RBP14.63□□□□□ -0.07
SNF8-206ENST00000509989 CMASQ8NFW8 434 aaPredicted RBP14.63□□□□□ -0.07
SNF8-206ENST00000509989 ZNF461Q8TAF7 563 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 TIGD1Q96MW7 591 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 MYADMQ96S97 322 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 CGRRF1Q99675 332 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 PLEKHA4Q9H4M7 779 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 TMLHEQ9NVH6 421 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 DNMT3BQ9UBC3 853 aaKnown RBP14.63□□□□□ -0.07
SNF8-206ENST00000509989 MAN1B1Q9UKM7 699 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 FAM50BQ9Y247 325 aa14.63□□□□□ -0.07
SNF8-206ENST00000509989 FAM86C2PA6NEL3 165 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 BIN1O00499 593 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 OBSL1O75147 1896 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 AKAP3O75969 853 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 CYP11A1P05108 521 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 ASGR2P07307 311 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 CPB1P15086 417 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 TYMPP19971 482 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 ACAT1P24752 427 aaKnown RBP14.62□□□□□ -0.07
SNF8-206ENST00000509989 CREMQ03060 361 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 ADCY1Q08828 1119 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 PPM1LQ5SGD2 360 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 PDXDC1Q6P996 788 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 NT5DC4Q86YG4 428 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 WDR49Q8IV35 697 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 GUF1Q8N442 669 aaKnown RBP14.62□□□□□ -0.07
SNF8-206ENST00000509989 PDCL2Q8N4E4 241 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 ATAD1Q8NBU5 361 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 APPL2Q8NEU8 664 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 PARD3BQ8TEW8 1205 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 HDAC7Q8WUI4 952 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 RIPOR3Q96MK2 946 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 LPIN3Q9BQK8 851 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 POLIQ9UNA4 740 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 TRAF3IP3Q9Y228 551 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 SLC27A5Q9Y2P5 690 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 DENND4CQ5VZ89 1909 aa14.62□□□□□ -0.07
SNF8-206ENST00000509989 COL4A3Q01955 1670 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 GREB1Q4ZG55 1949 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 H7C4K7 107 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 VNN1O95497 513 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 ODC1P11926 461 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 ATF2P15336 505 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 TNNI1P19237 187 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 SNRPFP62306 86 aaKnown RBP14.61□□□□□ -0.07
SNF8-206ENST00000509989 CAMK4Q16566 473 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 SOWAHAQ2M3V2 549 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 TDRD10Q5VZ19 366 aaKnown RBP14.61□□□□□ -0.07
SNF8-206ENST00000509989 CEP135Q66GS9 1140 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 C15orf39Q6ZRI6 1047 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 SLC9A9Q8IVB4 645 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 HS6ST3Q8IZP7 471 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 STKLD1Q8NE28 680 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 ITFG1Q8TB96 612 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 CACTINQ8WUQ7 758 aaKnown RBP14.61□□□□□ -0.07
SNF8-206ENST00000509989 RSAD2Q8WXG1 361 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 SMARCE1Q969G3 411 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 ANKRD36BP1Q96IX9 119 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 CYP4F11Q9HBI6 524 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 KIAA1586Q9HCI6 787 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 WDR6Q9NNW5 1121 aaKnown RBP14.61□□□□□ -0.07
SNF8-206ENST00000509989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNF8-206ENST00000509989 ZDHHC7Q9NXF8 308 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 CEP72Q9P209 647 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 LIMD1Q9UGP4 676 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 ITGA11Q9UKX5 1188 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 INSL5Q9Y5Q6 135 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 SNX9Q9Y5X1 595 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 CLUHO75153 1309 aa14.61□□□□□ -0.07
SNF8-206ENST00000509989 MTMR11A4FU01 709 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 ATP2C2O75185 946 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 TNNC2P02585 160 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 C4BPAP04003 597 aaKnown RBP14.6□□□□□ -0.07
SNF8-206ENST00000509989 TRIM49P0CI25 452 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 TRIM49CP0CI26 452 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 NR2F2P24468 414 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 CCR2P41597 374 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 MYL6P60660 151 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 RBP5P82980 135 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 DUSP4Q13115 394 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 DUOXA2Q1HG44 320 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 SLC5A9Q2M3M2 681 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 SV2CQ496J9 727 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 LIN9Q5TKA1 542 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 ZNF658Q5TYW1 1059 aaPredicted RBP14.6□□□□□ -0.07
SNF8-206ENST00000509989 ANKRD40Q6AI12 368 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 GET4Q7L5D6 327 aaPredicted RBP14.6□□□□□ -0.07
SNF8-206ENST00000509989 USP37Q86T82 979 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 KBTBD7Q8WVZ9 684 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 TCEAL4Q96EI5 215 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 HPDLQ96IR7 371 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms