RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	CAPN9	O14815	690 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	DDAH1	O94760	285 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	CYP3A4	P08684	503 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	SRGAP2C	P0DJJ0	459 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	CLK2	P49760	499 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	ANTXR2	P58335	489 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	KCNH2	Q12809	1159 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	DMC1	Q14565	340 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	ITPRIPL2	Q3MIP1	535 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	USP39	Q53GS9	565 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	WWC2	Q6AWC2	1192 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	NOTUM	Q6P988	496 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	CWC27	Q6UX04	472 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	TRIM46	Q7Z4K8	759 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	MARCH9	Q86YJ5	346 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	SYT12	Q8IV01	421 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	TCEAL8	Q8IYN2	117 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	TMEFF1	Q8IYR6	380 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	GTPBP2	Q9BX10	602 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	TPSD1	Q9BZJ3	242 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	CSRNP2	Q9H175	543 aa		10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-223	ENST00000509900	ATXN2	Q99700	1313 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	TRABD2B	A6NFA1	517 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	TRDMT1	O14717	391 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	SH3BP5	O60239	455 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	OPHN1	O60890	802 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	NTRK1	P04629	796 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	ATF2	P15336	505 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	TKT	P29401	623 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	ELF1	P32519	619 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	PTGER3	P43115	390 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	GNAQ	P50148	359 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	SET	Q01105	290 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	TRDN	Q13061	729 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	AP3B2	Q13367	1082 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	NAB2	Q15742	525 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	MAPK6	Q16659	721 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	AMHR2	Q16671	573 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	XKR3	Q5GH77	459 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	STXBP5	Q5T5C0	1151 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	TOGARAM2	Q6ZUX3	1019 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	ARMCX6	Q7L4S7	300 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	TMPRSS7	Q7RTY8	843 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	CCDC82	Q8N4S0	544 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	RPLP0P6	Q8NHW5	317 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	PRPF31	Q8WWY3	499 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	CCDC51	Q96ER9	411 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	FCRL3	Q96P31	734 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	GPR88	Q9GZN0	384 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	CXCL16	Q9H2A7	254 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	CYP4F11	Q9HBI6	524 aa		10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	POLM	Q9NP87	494 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	UBR5	O95071	2799 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	MYO18A	Q92614	2054 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-223	ENST00000509900	CAPN8	A6NHC0	703 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	OTOL1	A6NHN0	477 aa	Predicted RBP	10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	PTGES	O14684	152 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	TNFRSF10B	O14763	440 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	CHMP2A	O43633	222 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	ERLIN2	O94905	339 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	WISP1	O95388	367 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	CFI	P05156	583 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	PRKCB	P05771	671 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	RXRA	P19793	462 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	AXL	P30530	894 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	ADCY7	P51828	1080 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	ATXN3	P54252	364 aa	Predicted RBP	10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	NAPA	P54920	295 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	LAMTOR4	Q0VGL1	99 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	SART3	Q15020	963 aa	Known RBP	10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	C20orf194	Q5TEA3	1177 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	IQCE	Q6IPM2	695 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	SLC8B1	Q6J4K2	584 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	HAUS6	Q7Z4H7	955 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	RASSF3	Q86WH2	238 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	TEX2	Q8IWB9	1127 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	MINDY1	Q8N5J2	469 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	FAM181A	Q8N9Y4	354 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	ZNF511	Q8NB15	262 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	LEMD2	Q8NC56	503 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	EZH1	Q92800	747 aa	Predicted RBP	10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	RILPL2	Q969X0	211 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	LENG9	Q96B70	501 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	ZNF512	Q96ME7	567 aa	Predicted RBP	10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	ASAH2	Q9NR71	780 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	TAF6L	Q9Y6J9	622 aa		10.61	□□□□□ -0.71
PTPN20-223	ENST00000509900	OBSL1	O75147	1896 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900		A0A1W2PRU2	124 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	ADAMTS3	O15072	1205 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	ARF4	P18085	180 aa	Predicted RBP	10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	TWF1	Q12792	350 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	PRR16	Q569H4	304 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	JAKMIP3	Q5VZ66	844 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	PLA2G4F	Q68DD2	849 aa		10.6	□□□□□ -0.71
PTPN20-223	ENST00000509900	NAIF1	Q69YI7	327 aa	Predicted RBP	10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms