RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 STK17AQ9UEE5 414 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 FBXO2Q9UK22 296 aaPredicted RBP16.67■□□□□ 0.26
TPM3-219ENST00000509409 CITO14578 2027 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 MOSPD3O75425 235 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 SYT1P21579 422 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 FCARP24071 287 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 GDI1P31150 447 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 VIPR2P41587 438 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 RESTQ13127 1097 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 TEAD2Q15562 447 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 ATAD1Q8NBU5 361 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
TPM3-219ENST00000509409 FAM200AQ8TCP9 573 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 IRF7Q92985 503 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 TMEM209Q96SK2 561 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 GPR88Q9GZN0 384 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 ST6GALNAC4Q9H4F1 302 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 DPP3Q9NY33 737 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
TPM3-219ENST00000509409 A0A1W2PRU2 124 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 MTMR11A4FU01 709 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 MYMKA6NI61 221 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 PIRO00625 290 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 MAN2B1O00754 1011 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 NRG2O14511 850 aaPredicted RBP16.65■□□□□ 0.26
TPM3-219ENST00000509409 CYB561D2O14569 222 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 ZNF263O14978 683 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 SPTLC1O15269 473 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 VNN2O95498 520 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 IDEP14735 1019 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 GAP43P17677 238 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 PSMC3P17980 439 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 MAGEA9P43362 315 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 CSTF1Q05048 431 aaKnown RBP16.65■□□□□ 0.26
TPM3-219ENST00000509409 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 YAF2Q8IY57 180 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 SHKBP1Q8TBC3 707 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 DNASE1L2Q92874 299 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 ACCSQ96QU6 501 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
TPM3-219ENST00000509409 IKZF4Q9H2S9 585 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 CRISPLD1Q9H336 500 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 SEL1LQ9UBV2 794 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 DSEQ9UL01 958 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 NDRG2Q9UN36 371 aaKnown RBP16.65■□□□□ 0.26
TPM3-219ENST00000509409 C2CD2Q9Y426 696 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 STYXL1Q9Y6J8 313 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 MYH11P35749 1972 aa16.65■□□□□ 0.26
TPM3-219ENST00000509409 NOTCH4Q99466 2003 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 SOAT2O75908 522 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 GCNT3O95395 438 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 TARSP26639 723 aaKnown RBP16.64■□□□□ 0.25
TPM3-219ENST00000509409 TAF6P49848 677 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 CDR1P51861 262 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 EPHA5P54756 1037 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 TAF12Q16514 161 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 VITQ6UXI7 678 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 DNAJB7Q7Z6W7 309 aaPredicted RBP16.64■□□□□ 0.25
TPM3-219ENST00000509409 GPIHBP1Q8IV16 184 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 MFSD6LQ8IWD5 586 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 SYCP3Q8IZU3 236 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 NOC3LQ8WTT2 800 aaKnown RBP16.64■□□□□ 0.25
TPM3-219ENST00000509409 DEPDC1BQ8WUY9 529 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 E2F7Q96AV8 911 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 ATXN3LQ9H3M9 355 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 ZNF334Q9HCZ1 680 aaPredicted RBP16.64■□□□□ 0.25
TPM3-219ENST00000509409 ASB3Q9Y575 518 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 PCDHB13Q9Y5F0 798 aa16.64■□□□□ 0.25
TPM3-219ENST00000509409 RIF1Q5UIP0 2472 aaKnown RBP16.63■□□□□ 0.25
TPM3-219ENST00000509409 HEPACAM2A8MVW5 462 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 DPYSL4O14531 572 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 IL18RAPO95256 599 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 STAT6P42226 847 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 TUFMP49411 452 aaKnown RBP16.63■□□□□ 0.25
TPM3-219ENST00000509409 POU5F1Q01860 360 aaKnown RBP16.63■□□□□ 0.25
TPM3-219ENST00000509409 MGAT5BQ3V5L5 792 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 L1TD1Q5T7N2 865 aaKnown RBP16.63■□□□□ 0.25
TPM3-219ENST00000509409 ITIH5Q86UX2 942 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 MAML2Q8IZL2 1156 aaPredicted RBP16.63■□□□□ 0.25
TPM3-219ENST00000509409 SEPT5Q99719 369 aaPredicted RBP16.63■□□□□ 0.25
TPM3-219ENST00000509409 FAM213AQ9BRX8 229 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 TRPV4Q9HBA0 871 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 FBXO4Q9UKT5 387 aa16.63■□□□□ 0.25
TPM3-219ENST00000509409 CFAP54Q96N23 3096 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 VPS13AQ96RL7 3174 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 KINO60870 393 aaKnown RBP16.62■□□□□ 0.25
TPM3-219ENST00000509409 FGF19O95750 216 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 CYP11A1P05108 521 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 ADSSP30520 456 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 TFAMQ00059 246 aaKnown RBP16.62■□□□□ 0.25
TPM3-219ENST00000509409 KCNA1Q09470 495 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 VEPH1Q14D04 833 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms