RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SIGLEC14Q08ET2 396 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 TMEM132DQ14C87 1099 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF280DQ6N043 979 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 ARMCX5Q6P1M9 558 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 C11orf57Q6ZUT1 292 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 HFE2Q6ZVN8 426 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 GRASPQ7Z6J2 395 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 UBALD2Q8IYN6 164 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 TMEM174Q8WUU8 243 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF707Q96C28 371 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 SUSD3Q96L08 255 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 TMEM206Q9H813 350 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 PDE11AQ9HCR9 933 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 SIX4Q9UIU6 781 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 PCDHB8Q9UN66 801 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 TIMM13Q9Y5L4 95 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 PDXKO00764 312 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 SPTLC1O15269 473 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 EXTL3O43909 919 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 LDHAP00338 332 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 LRG1P02750 347 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 LRPAP1P30533 357 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 STX17P56962 302 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 ROR1Q01973 937 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 YWHAHQ04917 246 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 CYP24A1Q07973 514 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 TDGQ13569 410 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 NFIL3Q16649 462 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 SPATA1Q5VX52 437 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 CAVIN1Q6NZI2 390 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 RDH13Q8NBN7 331 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 FAM122AQ96E09 287 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 RHOBTB2Q9BYZ6 727 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 MFSD1Q9H3U5 465 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 ASB7Q9H672 318 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 CYP4F11Q9HBI6 524 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 FBXL5Q9UKA1 691 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 FBXL21Q9UKT6 434 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 DERAQ9Y315 318 aa9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-213ENST00000509357 ARHGEF37A1IGU5 675 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 LRRIQ3A6PVS8 624 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 IL18RAPO95256 599 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 SMC2O95347 1197 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 ODC1P11926 461 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 RFX1P22670 979 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 CCNE1P24864 410 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 NTHL1P78549 312 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 TFAMQ00059 246 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 SNRNP35Q16560 246 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 PABPC1LQ4VXU2 614 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 C9orf57Q5W0N0 161 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 SLC8B1Q6J4K2 584 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 KLHL10Q6JEL2 608 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 ELMOD1Q8N336 334 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF461Q8TAF7 563 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 CACTINQ8WUQ7 758 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 NELFBQ8WX92 580 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 MYADMQ96S97 322 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 HSD3B7Q9H2F3 369 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 SMOC2Q9H3U7 446 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 DPP3Q9NY33 737 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 IGSF9Q9P2J2 1179 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 NME7Q9Y5B8 376 aa9.43□□□□□ -0.9
PDLIM5-213ENST00000509357 ANO9A1A5B4 782 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 WDR27A2RRH5 827 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 M0QZQ0 153 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 STK25O00506 426 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 VNN1O95497 513 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 MBD3O95983 291 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 KRT19P08727 400 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 ATF2P15336 505 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 PTPN2P17706 415 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 PAX3P23760 479 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 NR2F2P24468 414 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 HOXA9P31269 272 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 NLRP12P59046 1061 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 LILRA4P59901 499 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 POU5F1Q01860 360 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 PPP3CAQ08209 521 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 ADCY1Q08828 1119 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 MRPL58Q14197 206 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 PSMD6Q15008 389 aa9.42□□□□□ -0.9
PDLIM5-213ENST00000509357 KLHL40Q2TBA0 621 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms