RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 RSPO2Q6UXX9 243 aaPredicted RBP21.72■■□□□ 1.07
HOXC6-204ENST00000509328 MLKLQ8NB16 471 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.72■■□□□ 1.07
HOXC6-204ENST00000509328 HDAC7Q8WUI4 952 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 HPDLQ96IR7 371 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 GDAP2Q9NXN4 497 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 FBXL5Q9UKA1 691 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 XIRP2A4UGR9 3374 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 TCF20Q9UGU0 1960 aaKnown RBP21.71■■□□□ 1.07
HOXC6-204ENST00000509328 PHACTR2O75167 634 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 C4BPAP04003 597 aaKnown RBP21.71■■□□□ 1.07
HOXC6-204ENST00000509328 BIRC3Q13489 604 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 TRPC3Q13507 836 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 CLUL1Q15846 466 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 SYCE2Q6PIF2 218 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 METTL23Q86XA0 190 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 SMRP1Q8NCR6 262 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 CEP63Q96MT8 703 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 DUSP9Q99956 384 aaKnown RBP21.71■■□□□ 1.07
HOXC6-204ENST00000509328 PLEKHA4Q9H4M7 779 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 MAN1C1Q9NR34 630 aa21.71■■□□□ 1.07
HOXC6-204ENST00000509328 UNC80Q8N2C7 3258 aa21.7■■□□□ 1.06
HOXC6-204ENST00000509328 CST3P01034 146 aaPredicted RBP21.7■■□□□ 1.06
HOXC6-204ENST00000509328 KCNQ1P51787 676 aa21.7■■□□□ 1.06
HOXC6-204ENST00000509328 SMAD4Q13485 552 aaKnown RBP21.7■■□□□ 1.06
HOXC6-204ENST00000509328 ZACNQ401N2 412 aa21.7■■□□□ 1.06
HOXC6-204ENST00000509328 C1orf220Q5T0J3 134 aa21.7■■□□□ 1.06
HOXC6-204ENST00000509328 TDRD10Q5VZ19 366 aaKnown RBP21.7■■□□□ 1.06
HOXC6-204ENST00000509328 PTCRAQ6ISU1 281 aaPredicted RBP21.7■■□□□ 1.06
HOXC6-204ENST00000509328 RBM43Q6ZSC3 357 aaKnown RBP21.7■■□□□ 1.06
HOXC6-204ENST00000509328 SFXN1Q9H9B4 322 aa21.7■■□□□ 1.06
HOXC6-204ENST00000509328 FBXW11Q9UKB1 542 aa21.7■■□□□ 1.06
HOXC6-204ENST00000509328 OR6C75A6NL08 312 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 SPDYE4A6NLX3 237 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 HUS1O60921 280 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 SPATA31D3P0C874 917 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 TRIM49P0CI25 452 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 TRIM49CP0CI26 452 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 ATICP31939 592 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 STX17P56962 302 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 NLRP12P59046 1061 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 ROR1Q01973 937 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 SPATA31D4Q6ZUB0 917 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 FILIP1Q7Z7B0 1213 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 KREMEN2Q8NCW0 462 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 S1PR5Q9H228 398 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 RWDD2AQ9UIY3 292 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 FAM50BQ9Y247 325 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 SNX9Q9Y5X1 595 aa21.69■■□□□ 1.06
HOXC6-204ENST00000509328 C2orf16Q68DN1 1984 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 GRXCR2A6NFK2 248 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 MBTPS2O43462 519 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 STX10O60499 249 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 STAU1O95793 577 aaKnown RBP21.68■■□□□ 1.06
HOXC6-204ENST00000509328 GTF2H1P32780 548 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 MYL6P60660 151 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 ITIH3Q06033 890 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 NCOA4Q13772 614 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 TJAP1Q5JTD0 557 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 WSCD1Q658N2 575 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 C15orf39Q6ZRI6 1047 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 SV2AQ7L0J3 742 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 THEM5Q8N1Q8 247 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 TMEM86AQ8N2M4 240 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 TOP6BLQ8N6T0 577 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 ZNF461Q8TAF7 563 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 SYAP1Q96A49 352 aaPredicted RBP21.68■■□□□ 1.06
HOXC6-204ENST00000509328 DACH1Q9UI36 760 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 L1RE1Q9UN81 338 aa21.68■■□□□ 1.06
HOXC6-204ENST00000509328 WDR27A2RRH5 827 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 ABLIM3O94929 683 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 VNN1O95497 513 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 BMP1P13497 986 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 ARPP19P56211 112 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 PPP3CAQ08209 521 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 RARS2Q5T160 578 aaKnown RBP21.67■■□□□ 1.06
HOXC6-204ENST00000509328 CCDC183Q5T5S1 534 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 TPGS2Q68CL5 300 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 CES5AQ6NT32 575 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 DPH6Q7L8W6 267 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 FRMD5Q7Z6J6 570 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 PDCL2Q8N4E4 241 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 C12orf76Q8N812 135 aaPredicted RBP21.67■■□□□ 1.06
HOXC6-204ENST00000509328 SPATA18Q8TC71 538 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 APOL5Q9BWW9 433 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 ADAM7Q9H2U9 754 aa21.67■■□□□ 1.06
HOXC6-204ENST00000509328 METTL14Q9HCE5 456 aaKnown RBP21.67■■□□□ 1.06
HOXC6-204ENST00000509328 ARMCX3Q9UH62 379 aaPredicted RBP21.67■■□□□ 1.06
HOXC6-204ENST00000509328 FGFR1OPO95684 399 aaKnown RBP21.66■■□□□ 1.06
HOXC6-204ENST00000509328 CPB1P15086 417 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 GCLMP48507 274 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 DPCR1Q3MIW9 517 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 LIN9Q5TKA1 542 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 LIMS2Q7Z4I7 341 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 CMASQ8NFW8 434 aaPredicted RBP21.66■■□□□ 1.06
HOXC6-204ENST00000509328 XYLT2Q9H1B5 865 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 VRTNQ9H8Y1 702 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 TMEM8AQ9HCN3 771 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 ZDHHC7Q9NXF8 308 aa21.66■■□□□ 1.06
HOXC6-204ENST00000509328 USP15Q9Y4E8 981 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms