RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 SMC1BQ8NDV3 1235 aa3.1□□□□□ -1.91
XRCC4-204ENST00000509268 FATE1Q969F0 183 aa3.1□□□□□ -1.91
XRCC4-204ENST00000509268 COQ8BQ96D53 544 aa3.1□□□□□ -1.91
XRCC4-204ENST00000509268 MS4A5Q9H3V2 200 aa3.1□□□□□ -1.91
XRCC4-204ENST00000509268 RBM12Q9NTZ6 932 aaKnown RBP3.1□□□□□ -1.91
XRCC4-204ENST00000509268 NR2E3Q9Y5X4 410 aa3.1□□□□□ -1.91
XRCC4-204ENST00000509268 ACTL7AQ9Y615 435 aa3.1□□□□□ -1.91
XRCC4-204ENST00000509268 TCF20Q9UGU0 1960 aaKnown RBP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 SMIM22K7EJ46 135 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 SUN1O94901 812 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 POU3F2P20265 443 aaPredicted RBP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 Q4G0T1 1027 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 CT83Q5H943 113 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 AARS2Q5JTZ9 985 aaKnown RBP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 RASSF3Q86WH2 238 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 C8orf58Q8NAV2 365 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 HOXB13Q92826 284 aaPredicted RBP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 THOC3Q96J01 351 aaKnown RBP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 CAMKK2Q96RR4 588 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 GREM2Q9H772 168 aa3.09□□□□□ -1.91
XRCC4-204ENST00000509268 NOC2LQ9Y3T9 749 aaKnown RBP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.09□□□□□ -1.91
XRCC4-204ENST00000509268 LY6G6EA0A0G2JKS1 128 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SMAD6O43541 496 aaKnown RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 ENDOD1O94919 500 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 FPR1P21462 350 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 LSSP48449 732 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SART3Q15020 963 aaKnown RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 ATP2B3Q16720 1220 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 DACT2Q5SW24 774 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 UBAP2Q5T6F2 1119 aaKnown RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 MIS18BP1Q6P0N0 1132 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 ANKRD16Q6P6B7 361 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 FOXP4Q8IVH2 680 aaPredicted RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 EAF2Q96CJ1 260 aaPredicted RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 C5orf34Q96MH7 638 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SRPK1Q96SB4 655 aaKnown RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SCOCQ9UIL1 159 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SPATA31A3Q5VYP0 1347 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 WDR17Q8IZU2 1322 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 CCDC195A0A1B0GUA6 201 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 TCRBV7S2A1N4TA0A589 114 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 PRSS47A8MTI9 375 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 ZNF213O14771 459 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 TGFB3P10600 412 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 NEK4P51957 841 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 FSCN1Q16658 493 aaKnown RBP3.08□□□□□ -1.92
XRCC4-204ENST00000509268 LEXMQ3ZCV2 418 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SHC4Q6S5L8 630 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 TMPRSS9Q7Z410 1059 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 C11orf74Q86VG3 221 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SSH1Q8WYL5 1049 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 ASB2Q96Q27 587 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 LDAHQ9H6V9 325 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 ARHGEF3Q9NR81 526 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 SPTLC3Q9NUV7 552 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 DPP7Q9UHL4 492 aa3.08□□□□□ -1.92
XRCC4-204ENST00000509268 FNDC1Q4ZHG4 1894 aaPredicted RBP3.07□□□□□ -1.92
XRCC4-204ENST00000509268 HAUS5O94927 633 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 NXPH3O95157 252 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 ATP2B1P20020 1258 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 PCSK1P29120 753 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 HTR6P50406 440 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 CREMQ03060 361 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 ADRM1Q16186 407 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 MUM1L1Q5H9M0 696 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 FKBP10Q96AY3 582 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 GPR101Q96P66 508 aaPredicted RBP3.07□□□□□ -1.92
XRCC4-204ENST00000509268 TLR10Q9BXR5 811 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 IGSF5Q9NSI5 407 aa3.07□□□□□ -1.92
XRCC4-204ENST00000509268 VSX1Q9NZR4 365 aaPredicted RBP3.07□□□□□ -1.92
XRCC4-204ENST00000509268 GTPBP1O00178 669 aaKnown RBP3.06□□□□□ -1.92
XRCC4-204ENST00000509268 TOR1BO14657 336 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 KIAA0391O15091 583 aaKnown RBP3.06□□□□□ -1.92
XRCC4-204ENST00000509268 KPNA6O60684 536 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 GPR32O75388 356 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 T-ENOLP0DO92 83 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 NPTX2P47972 431 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 CDK17Q00537 523 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 RHDQ02161 417 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 PIGFQ07326 219 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 MTM1Q13496 603 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.06□□□□□ -1.92
XRCC4-204ENST00000509268 BROXQ5VW32 411 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 LVRNQ6Q4G3 990 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 CHSY1Q86X52 802 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 DCP1BQ8IZD4 617 aaKnown RBP3.06□□□□□ -1.92
XRCC4-204ENST00000509268 NR4A3Q92570 626 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 ACAP3Q96P50 834 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 PUS7Q96PZ0 661 aaKnown RBP3.06□□□□□ -1.92
XRCC4-204ENST00000509268 PDGFCQ9NRA1 345 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 USP35Q9P2H5 1018 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 CDYLQ9Y232 598 aa3.06□□□□□ -1.92
XRCC4-204ENST00000509268 A0A0B4J269 797 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 ABLIM3O94929 683 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 GAS8-AS1O95177 125 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 JUPP14923 745 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 KCNJ5P48544 419 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 ALDH9A1P49189 494 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 POU6F2P78424 691 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms