RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 CCDC51Q96ER9 411 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 CEP170P1Q96L14 293 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 MYADMQ96S97 322 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 NT5C3AQ9H0P0 336 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 DLGAP2Q9P1A6 1054 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 TMEM63CQ9P1W3 806 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 FNIP2Q9P278 1114 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 IPPQ9Y573 584 aa9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 TPRP12270 2363 aaKnown RBP9.58□□□□□ -0.88
COL4A3BP-206ENST00000508809 CLUHO75153 1309 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 ARL5CA6NH57 179 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 LMNAP02545 664 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 LAMP2P13473 410 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 ITGA4P13612 1032 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 GATA4P43694 442 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 OR1G1P47890 313 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 SERPINB4P48594 390 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 GLUD2P49448 558 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 PTENP60484 403 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 TOB2Q14106 344 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 EPHA7Q15375 998 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 RNF149Q8NC42 400 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 GSTCDQ8NEC7 633 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 TCP11Q8WWU5 503 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 SMG7Q92540 1137 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 HAS1Q92839 578 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 GAD1Q99259 594 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 EIF2AQ9BY44 585 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 SRA1Q9HD15 236 aaKnown RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 SLC2A4RGQ9NR83 387 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 GIT1Q9Y2X7 761 aa9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 PRG3Q9Y2Y8 225 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-206ENST00000508809 NOTCH4Q99466 2003 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 TBX3O15119 743 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 TGM5O43548 720 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 NDUFB5O43674 189 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 TSPAN1O60635 241 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 SLITRK3O94933 977 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 KIF4AO95239 1232 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 PROCP04070 461 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 GCFC2P16383 781 aaKnown RBP9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 YWHABP31946 246 aaKnown RBP9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 SPIRE1Q08AE8 756 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 MXD4Q14582 209 aaPredicted RBP9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 EMC2Q15006 297 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 INF2Q27J81 1249 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 CEP135Q66GS9 1140 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 NOTUMQ6P988 496 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 RUFY3Q7L099 469 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 MAP4K3Q8IVH8 894 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 SNX29Q8TEQ0 813 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 LXNQ9BS40 222 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 COLEC11Q9BWP8 271 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 CSRNP2Q9H175 543 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 TBC1D17Q9HA65 648 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 XPNPEP1Q9NQW7 623 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 ZDHHC7Q9NXF8 308 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 RGL1Q9NZL6 768 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
COL4A3BP-206ENST00000508809 F5P12259 2224 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 MIA3Q5JRA6 1907 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 ZMYM2Q9UBW7 1377 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 MYH15Q9Y2K3 1946 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 SPTBN2O15020 2390 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 F8W810 466 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 EPB41L2O43491 1005 aaKnown RBP9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 PHACTR2O75167 634 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 LYPLA2O95372 231 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 ITGB2P05107 769 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 SPATA31D3P0C874 917 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 ARL2P36404 184 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 MLH1P40692 756 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 SCNN1GP51170 649 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 STARD6P59095 220 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 NCBP1Q09161 790 aaKnown RBP9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 HTR4Q13639 388 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 USP41Q3LFD5 358 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 FUT10Q6P4F1 479 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 SPATA31D4Q6ZUB0 917 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 NEK8Q86SG6 692 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 PALB2Q86YC2 1186 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 IL22RA1Q8N6P7 574 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 RMDN1Q96DB5 314 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 BORCS6Q96GS4 357 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 PHF20Q9BVI0 1012 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 ZSWIM4Q9H7M6 989 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 CA14Q9ULX7 337 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 SIT1Q9Y3P8 196 aa9.55□□□□□ -0.88
COL4A3BP-206ENST00000508809 HES2Q9Y543 173 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms