RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, human

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL4A3BP-205	ENST00000508692	EXOSC9	Q06265	439 aa	Known RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CHAF1A	Q13111	956 aa	Predicted RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	RAB32	Q13637	225 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DAG1	Q14118	895 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	GRAMD1B	Q3KR37	738 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	AMOT	Q4VCS5	1084 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	COL23A1	Q86Y22	540 aa	Predicted RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	MYLK4	Q86YV6	388 aa	Predicted RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SDR16C5	Q8N3Y7	309 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FITM2	Q8N6M3	262 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SCAMP4	Q969E2	229 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	ZNF518B	Q9C0D4	1074 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	REXO4	Q9GZR2	422 aa	Known RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	GSTO2	Q9H4Y5	243 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SLAMF7	Q9NQ25	335 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	TRMT13	Q9NUP7	481 aa	Known RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CPNE7	Q9UBL6	633 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	RGS17	Q9UGC6	210 aa	Predicted RBP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	LRCH1	Q9Y2L9	728 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SLC30A1	Q9Y6M5	507 aa		4.58	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	NPEPPSL1	A6NEC2	478 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	POM121B	A6NF01	834 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	PRSS29P	A6NIE9	313 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	MYO1C	O00159	1063 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	BTN3A1	O00481	513 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	KPNA5	O15131	536 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	RAD17	O75943	681 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	STC2	O76061	302 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	PARP1	P09874	1014 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	STK3	Q13188	491 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DUSP8	Q13202	625 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DHX8	Q14562	1220 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	R3HDM1	Q15032	1099 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FAM214A	Q32MH5	1076 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FAM209B	Q5JX69	171 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SPDYA	Q5MJ70	313 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	UTP14C	Q5TAP6	766 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	ANKS6	Q68DC2	871 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	UBE3B	Q7Z3V4	1068 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	GSPT2	Q8IYD1	628 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	MDGA1	Q8NFP4	955 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DNER	Q8NFT8	737 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	OR52N2	Q8NGI0	321 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	OR14A2	Q96R54	314 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	P2RX7	Q99572	595 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	LSM14B	Q9BX40	385 aa	Known RBP	4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	BRIP1	Q9BX63	1249 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DEF6	Q9H4E7	631 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SPON1	Q9HCB6	807 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SACM1L	Q9NTJ5	587 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	POGK	Q9P215	609 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	C11orf21	Q9P2W6	132 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	PLEKHM1	Q9Y4G2	1056 aa		4.57	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	TRIM43B	A6NCK2	446 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CYP27B1	O15528	508 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FGF18	O76093	207 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	ABHD16A	O95870	558 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	XRCC6	P12956	609 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SLC13A2	Q13183	592 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FHL2	Q14192	279 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	ELAVL1	Q15717	326 aa	Known RBP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	PRR16	Q569H4	304 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FAM83B	Q5T0W9	1011 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	XRRA1	Q6P2D8	792 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	BEND5	Q7L4P6	421 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	POLN	Q7Z5Q5	900 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	USP37	Q86T82	979 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SESTD1	Q86VW0	696 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CIR1	Q86X95	450 aa	Predicted RBP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	XYLT1	Q86Y38	959 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	D2HGDH	Q8N465	521 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CCDC33	Q8N5R6	958 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	ATP11C	Q8NB49	1132 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	NUP133	Q8WUM0	1156 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	MIEF2	Q96C03	454 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	TMEM176A	Q96HP8	235 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	WWC2-AS2	Q96NR7	200 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	MOGAT1	Q96PD6	335 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	EIF2A	Q9BY44	585 aa	Known RBP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	MEGF9	Q9H1U4	602 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CERS4	Q9HA82	394 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	A1CF	Q9NQ94	594 aa	Known RBP	4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SH3BP1	Q9Y3L3	701 aa		4.56	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	DRGX	A6NNA5	263 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	ZNF785	A8K8V0	405 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	GOLGA6L6	A8MZA4	724 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692		F5H423	210 aa	Predicted RBP	4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	APOL1	O14791	398 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	TCEA3	O75764	348 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	AGFG2	O95081	481 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	FOS	P01100	380 aa	Predicted RBP	4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CYP2C9	P11712	490 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	CKB	P12277	381 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	TSHR	P16473	764 aa		4.55	□□□□□ -1.68
COL4A3BP-205	ENST00000508692	SLC6A4	P31645	630 aa		4.55	□□□□□ -1.68

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