RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 STK39Q9UEW8 545 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 CYB561D2O14569 222 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 FAM163BP0C2L3 166 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 ASPAP45381 313 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 MTIF2P46199 727 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 COPB1P53618 953 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 VARS2Q5ST30 1063 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 DPH6Q7L8W6 267 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 ADGRD2Q7Z7M1 963 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 OSTM1Q86WC4 334 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 PDCL2Q8N4E4 241 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 TOP6BLQ8N6T0 577 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 UBR7Q8N806 425 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 EHBP1Q8NDI1 1231 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 TATDN2Q93075 761 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 TCF25Q9BQ70 676 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 BCO2Q9BYV7 579 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 SIX2Q9NPC8 291 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 TAB2Q9NYJ8 693 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 MTRRQ9UBK8 725 aa16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-211ENST00000508679 ADAM12O43184 909 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 TACC1O75410 805 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 GLUD2P49448 558 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 MYL7Q01449 175 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 COL19A1Q14993 1142 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 WSCD1Q658N2 575 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 PDE12Q6L8Q7 609 aaKnown RBP16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 PRSS55Q6UWB4 352 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 DEFB123Q8N688 67 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 FAXDC2Q96IV6 333 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 PKMYT1Q99640 499 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 NGRNQ9NPE2 291 aaKnown RBP16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 FNIP2Q9P278 1114 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 BACE2Q9Y5Z0 518 aa16.06■□□□□ 0.16
CALCOCO2-211ENST00000508679 HCRTO43612 131 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 PHACTR2O75167 634 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 CXCL14O95715 111 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 CNPP09543 421 aaKnown RBP16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 SLC9A1P19634 815 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 PIK3CAP42336 1068 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 TRPC3Q13507 836 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 ZNF699Q32M78 642 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 WDR72Q3MJ13 1102 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 SLC8B1Q6J4K2 584 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 DSTYKQ6XUX3 929 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 SPATA18Q8TC71 538 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 MYLIPQ8WY64 445 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 KLHL5Q96PQ7 755 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 VPS16Q9H269 839 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 PRUNE2Q8WUY3 3088 aa16.05■□□□□ 0.16
CALCOCO2-211ENST00000508679 TEX28O15482 410 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 VNN2O95498 520 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 ODC1P11926 461 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 WARSP23381 471 aaKnown RBP16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 PON1P27169 355 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 CDH8P55286 799 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 APBA1Q02410 837 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 ZNF667Q5HYK9 610 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 PHLDB3Q6NSJ2 640 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 LILRA6Q6PI73 481 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 TMC7Q7Z402 723 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 OR10T2Q8NGX3 314 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 SLC22A17Q8WUG5 538 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 NAP1L5Q96NT1 182 aaPredicted RBP16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 SMYD3Q9H7B4 428 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 RTN4Q9NQC3 1192 aaKnown RBP16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 FBXL5Q9UKA1 691 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 SIK3Q9Y2K2 1263 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 COL6A3P12111 3177 aa16.04■□□□□ 0.16
CALCOCO2-211ENST00000508679 BRWD1Q9NSI6 2320 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 LGALS16A8MUM7 142 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 TULP1O00294 542 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 TEX33O43247 280 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 AP5Z1O43299 807 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 URODP06132 367 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 RPL17P18621 184 aaKnown RBP16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 LMO2P25791 158 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 INCA1Q0VD86 236 aa16.03■□□□□ 0.16
CALCOCO2-211ENST00000508679 NR1I3Q14994 352 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms