RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 VGLL4Q14135 290 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 PUM1Q14671 1186 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 MVPQ14764 893 aaKnown RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 EIF4HQ15056 248 aaKnown RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 ZBTB41Q5SVQ8 909 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 IQSEC1Q6DN90 963 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 ARHGEF18Q6ZSZ5 1173 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 ESPNLQ6ZVH7 1005 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 MIGA2Q7L4E1 593 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 CTU1Q7Z7A3 348 aaKnown RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 FAM83AQ86UY5 434 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 DDX42Q86XP3 938 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 REXO1L1PQ8IX06 675 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 CLRN3Q8NCR9 226 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 OR5AN1Q8NGI8 311 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 COG1Q8WTW3 980 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 OPTNQ96CV9 577 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 NEUROD6Q96NK8 337 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 R3HDMLQ9H3Y0 253 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 MTG2Q9H4K7 406 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 VTA1Q9NP79 307 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 TOPORSQ9NS56 1045 aaPredicted RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 TMOD2Q9NZR1 351 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 SAE1Q9UBE0 346 aaPredicted RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 SRRDQ9UH36 339 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 DNAI1Q9UI46 699 aa4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 APOBEC2Q9Y235 224 aaKnown RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 RPAP1Q9BWH6 1393 aaPredicted RBP4.24□□□□□ -1.73
UBE2D3-226ENST00000508635 GAKO14976 1311 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 PRSS38A1L453 326 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 LAMTOR5O43504 91 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 BRINP1O60477 761 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ENTPD3O75355 529 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ULK1O75385 1050 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 INSRRP14616 1297 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 RGS19P49795 217 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 MRE11P49959 708 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 BCAR1P56945 870 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 PPP2CBP62714 309 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 PPP2CAP67775 309 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 G3BP1Q13283 466 aaKnown RBP eCLIP4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 CRHR2Q13324 411 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ADAM15Q13444 863 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 PDCD1Q15116 288 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 PKN2Q16513 984 aaKnown RBP4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 TBR1Q16650 682 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 DGKDQ16760 1214 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 RNF151Q2KHN1 245 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZNF568Q3ZCX4 644 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 GPR158Q5T848 1215 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 OTUD7BQ6GQQ9 843 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 KIAA1841Q6NSI8 718 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 FRMD7Q6ZUT3 714 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 KANSL1Q7Z3B3 1105 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 LIMS2Q7Z4I7 341 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 CXorf67Q86X51 503 aaPredicted RBP4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZFPM1Q8IX07 1006 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 CMIPQ8IY22 773 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZGPATQ8N5A5 531 aaKnown RBP4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 SPATA5Q8NB90 893 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 SSH3Q8TE77 659 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 FAM151AQ8WW52 585 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 BRI3BPQ8WY22 251 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZKSCAN4Q969J2 545 aaPredicted RBP4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 HOOK2Q96ED9 719 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 LRRC37BQ96QE4 947 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 NOL10Q9BSC4 688 aaKnown RBP4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 BDH2Q9BUT1 245 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 IDI2Q9BXS1 227 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZNF341Q9BYN7 854 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZBTB40Q9NUA8 1239 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 KCMF1Q9P0J7 381 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 HMG20BQ9P0W2 317 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 ZNF112Q9UJU3 913 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 USP18Q9UMW8 372 aa4.23□□□□□ -1.73
UBE2D3-226ENST00000508635 GPR75-ASB3A0A0A6YYF3 556 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 CCL15-CCL14A0A0B4J2E2 113 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ANKRD62A6NC57 917 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 GPR39O43194 453 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 SURF6O75683 361 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 WDHD1O75717 1129 aaPredicted RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 LPLP06858 475 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 UQCRFS1P1P0C7P4 283 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 CETPP11597 493 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 HNRNPLP14866 589 aaKnown RBP eCLIP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 MCAMP43121 646 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 BTDP43251 543 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 SCAND1P57086 179 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 SESN3P58005 492 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 RHBDL3P58872 404 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 AMPD3Q01432 767 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 MECOMQ03112 1051 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 PPATQ06203 517 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 TCP10Q12799 353 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 PPIL2Q13356 520 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ACAP1Q15027 740 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 CCL15Q16663 113 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 CT83Q5H943 113 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ZMAT1Q5H9K5 638 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms