RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 COQ10AQ96MF6 247 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 DDX49Q9Y6V7 483 aaKnown RBP5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 FPGT-TNNI3KV9GXZ4 949 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 PIK3C2BO00750 1634 aa5.33□□□□□ -1.56
PDLIM5-211ENST00000508531 USP47Q96K76 1375 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 DRGXA6NNA5 263 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 CXorf49A8MYA2 514 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 NEMP1O14524 444 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 AKR1B10O60218 316 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 TYRP1P17643 537 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 SETQ01105 290 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 FSCN1Q16658 493 aaKnown RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 HSP90AB3PQ58FF7 597 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 ATXN7L2Q5T6C5 722 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 RD3Q7Z3Z2 195 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 KRT222Q8N1A0 295 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 CLRN3Q8NCR9 226 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 RIN2Q8WYP3 895 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 ANKRD7Q92527 254 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 PAWRQ96IZ0 340 aaKnown RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 R3HDMLQ9H3Y0 253 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 RWDD1Q9H446 243 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 PRDM13Q9H4Q3 707 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 KNSTRNQ9Y448 316 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 V9GYY5 206 aaPredicted RBP5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 RALGAPBQ86X10 1494 aa5.32□□□□□ -1.56
PDLIM5-211ENST00000508531 ROCK1Q13464 1354 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 MARCH11A6NNE9 402 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 PJA2O43164 708 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 CTIFO43310 598 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 PHF2O75151 1096 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 ITGAMP11215 1152 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 ENPP1P22413 925 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 LMO1P25800 156 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 DDIT3P35638 169 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 SSR1P43307 286 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 CLRN1P58418 232 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 C21orf58P58505 322 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 RAP2BP61225 183 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 LMOD3Q0VAK6 560 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 TRDNQ13061 729 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 RABEP1Q15276 862 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 MST1LQ2TV78 715 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 FAM47AQ5JRC9 791 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 ABHD17BQ5VST6 288 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 SYCE2Q6PIF2 218 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 TRMT2AQ8IZ69 625 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 TXLNBQ8N3L3 684 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 TNPO1Q92973 898 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 NCAPGQ9BPX3 1015 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 SMC4Q9NTJ3 1288 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 RNF181Q9P0P0 153 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 MAPRE3Q9UPY8 281 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 ATP11BQ9Y2G3 1177 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 PAXBP1Q9Y5B6 917 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 MORC2Q9Y6X9 1032 aaPredicted RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 CHD2O14647 1828 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 BRWD3Q6RI45 1802 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 EFCAB6Q5THR3 1501 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 CEP152O94986 1710 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 COL11A2P13942 1736 aaPredicted RBP5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 MST1RQ04912 1400 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 CAMTA1Q9Y6Y1 1673 aa5.31□□□□□ -1.56
PDLIM5-211ENST00000508531 VGLL3A8MV65 326 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 WNT10BO00744 389 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 ULK1O75385 1050 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 CDKL5O76039 1030 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 REC8O95072 547 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 CFIP05156 583 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 EGR2P11161 476 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 CXCR5P32302 372 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 PTH2RP49190 550 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 SESN3P58005 492 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 MXRA7P84157 204 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 DHCR24Q15392 516 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 PRR16Q569H4 304 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 MUM1L1Q5H9M0 696 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 AGAP9Q5VTM2 703 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 ZNF572Q7Z3I7 529 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 RHOT2Q8IXI1 618 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 SLC44A3Q8N4M1 653 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 OR56A1Q8NGH5 318 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 RAX2Q96IS3 184 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 QRSL1Q9H0R6 528 aaKnown RBP5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 IFT22Q9H7X7 185 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 RSAD1Q9HA92 442 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 PTCH1Q13635 1447 aa5.3□□□□□ -1.56
PDLIM5-211ENST00000508531 ANKRD30BQ9BXX2 1392 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 PLEKHG1Q9ULL1 1385 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 PNPLA7Q6ZV29 1317 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 CCDC141Q6ZP82 1450 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 KIF2AO00139 706 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 TUBB4AP04350 444 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 ELANEP08246 267 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 SNRPA1P09661 255 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 ZNF37AP17032 561 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 USP8P40818 1118 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms