RNA–Protein interactions for RNA: ENST00000508350.1

CDH18-208, Transcript of cadherin 18, human

TSL 4

Gene CDH18, Length 578 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH18-208	ENST00000508350	TNFRSF10A	O00220	468 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PIR	O00625	290 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PSMA7	O14818	248 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	HCRT	O43612	131 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CLASP2	O75122	1294 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	VNN1	O95497	513 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	EFEMP2	O95967	443 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	MBD3	O95983	291 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	LDHA	P00338	332 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CST3	P01034	146 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TNNC2	P02585	160 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	C4BPA	P04003	597 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	SOD2	P04179	222 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	ITGB3	P05106	788 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	KRT19	P08727	400 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TNNI1	P19237	187 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	LRPAP1	P30533	357 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RPL9	P32969	192 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PPM1A	P35813	382 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	GCLM	P48507	274 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	NRIP1	P48552	1158 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	VAMP7	P51809	220 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	NLRP12	P59046	1061 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	MYL6	P60660	151 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	SNRPF	P62306	86 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PLCB3	Q01970	1234 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	KRT17	Q04695	432 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	DLX2	Q07687	328 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PPP3CA	Q08209	521 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	BFSP1	Q12934	665 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	FOXC1	Q12948	553 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PAK1	Q13153	545 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	STIM1	Q13586	685 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	NFKBIB	Q15653	356 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PTPN14	Q15678	1187 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CLUL1	Q15846	466 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	DUOXA2	Q1HG44	320 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	COBLL1	Q53SF7	1204 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RTP2	Q5QGT7	225 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	KIAA0319	Q5VV43	1072 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TDRD10	Q5VZ19	366 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	WSCD1	Q658N2	575 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	DCLRE1A	Q6PJP8	1040 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RBM43	Q6ZSC3	357 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	EP400NL	Q6ZTU2	488 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TRAPPC11	Q7Z392	1133 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	SLC9A9	Q8IVB4	645 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RNF168	Q8IYW5	571 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CSGALNACT2	Q8N6G5	542 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	MRPL43	Q8N983	215 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	MAFA	Q8NHW3	353 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PRR7	Q8TB68	274 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PARD3B	Q8TEW8	1205 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RIN2	Q8WYP3	895 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	RSPH1	Q8WYR4	309 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	ZNF592	Q92610	1267 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	SENP8	Q96LD8	212 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	FNBP1	Q96RU3	617 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TMEM209	Q96SK2	561 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CGRRF1	Q99675	332 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TSG101	Q99816	390 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PI4K2A	Q9BTU6	479 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	HERC2P3	Q9BVR0	1158 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	SRRT	Q9BXP5	876 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	ZBP1	Q9H171	429 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	ASB7	Q9H672	318 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	SLC38A7	Q9NVC3	462 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CGN	Q9P2M7	1197 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PUF60	Q9UHX1	559 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	CDH22	Q9UJ99	828 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	POLI	Q9UNA4	740 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	AGAP1	Q9UPQ3	857 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	FRMD4B	Q9Y2L6	1034 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	DERA	Q9Y315	318 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	FCF1	Q9Y324	198 aa	Known RBP	4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	C2CD2	Q9Y426	696 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	PLXNA3	P51805	1871 aa		4.88	□□□□□ -1.63
CDH18-208	ENST00000508350	TCF20	Q9UGU0	1960 aa	Known RBP	4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	PRUNE2	Q8WUY3	3088 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	SYCE3	A1L190	88 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	CFAP99	D6REC4	459 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350		H3BQ06	376 aa	Predicted RBP	4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	TMEM189-UBE2V1	I3L0A0	370 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	CYB561D2	O14569	222 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	KIAA0391	O15091	583 aa	Known RBP	4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	CETN3	O15182	167 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	TEX28	O15482	410 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	KIF20A	O95235	890 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	GLP2R	O95838	553 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	AVP	P01185	164 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	HLA-DRA	P01903	254 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	CNP	P09543	421 aa	Known RBP	4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	WEE2	P0C1S8	567 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	OR4Q2	P0C623	313 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	TMEM191B	P0C7N4	346 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	CTSA	P10619	480 aa		4.87	□□□□□ -1.63
CDH18-208	ENST00000508350	EPB41	P11171	864 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms