RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 MYO1CO00159 1063 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 SPDEFO95238 335 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 SOX8P57073 446 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 BLOC1S1P78537 153 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
GYPA-205ENST00000508337 KIF22Q14807 665 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 GEN1Q17RS7 908 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 LAYNQ6UX15 382 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 SLC30A10Q6XR72 485 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 FAM90A1Q86YD7 464 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 ARHGEF19Q8IW93 802 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 CFAP52Q8N1V2 620 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 SNX19Q92543 992 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 TSR2Q969E8 191 aaKnown RBP6.45□□□□□ -1.38
GYPA-205ENST00000508337 WDR11Q9BZH6 1224 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 TINAGL1Q9GZM7 467 aaPredicted RBP6.45□□□□□ -1.38
GYPA-205ENST00000508337 HSFX1Q9UBD0 423 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 PCDHA6Q9UN73 950 aa6.45□□□□□ -1.38
GYPA-205ENST00000508337 CAPN8A6NHC0 703 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 RAMP2O60895 175 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 VPS4BO75351 444 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 ITGALP20701 1170 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 FDXRP22570 491 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 RPS7P62081 194 aaKnown RBP6.44□□□□□ -1.38
GYPA-205ENST00000508337 ANO6Q4KMQ2 910 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 ABHD17BQ5VST6 288 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
GYPA-205ENST00000508337 IGFL4Q6B9Z1 124 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 PPP1R3BQ86XI6 285 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 Q8N1X5 172 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 NSUN7Q8NE18 718 aaKnown RBP6.44□□□□□ -1.38
GYPA-205ENST00000508337 PTCD3Q96EY7 689 aaKnown RBP6.44□□□□□ -1.38
GYPA-205ENST00000508337 BOD1Q96IK1 185 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 PRRX2Q99811 253 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 TTPALQ9BTX7 342 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 B3GNT5Q9BYG0 378 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 SERHL2Q9H4I8 314 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 RSAD1Q9HA92 442 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 PRDM11Q9NQV5 511 aa6.44□□□□□ -1.38
GYPA-205ENST00000508337 PIH1D1Q9NWS0 290 aaKnown RBP6.44□□□□□ -1.38
GYPA-205ENST00000508337 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 PRAMEF33A0A0G2JMD5 474 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 PRPF3O43395 683 aaKnown RBP6.43□□□□□ -1.38
GYPA-205ENST00000508337 ORC4O43929 436 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 PRAMEF10O60809 474 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 MATN4O95460 622 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 ELANEP08246 267 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 HKR1P10072 659 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 CHRM3P20309 590 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 VAV2P52735 878 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 TGFB2P61812 414 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 NKX6-1P78426 367 aaPredicted RBP6.43□□□□□ -1.38
GYPA-205ENST00000508337 CCDC149Q6ZUS6 474 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 SLC44A3Q8N4M1 653 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 LARP4BQ92615 738 aaKnown RBP6.43□□□□□ -1.38
GYPA-205ENST00000508337 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
GYPA-205ENST00000508337 SCAND2PQ9GZW5 306 aaPredicted RBP6.43□□□□□ -1.38
GYPA-205ENST00000508337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.43□□□□□ -1.381e-7■■■■■ 33.2
GYPA-205ENST00000508337 CFAP69A5D8W1 941 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 MARCH11A6NNE9 402 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 PHGDHO43175 533 aaKnown RBP6.42□□□□□ -1.38
GYPA-205ENST00000508337 SOAT2O75908 522 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 KIF20AO95235 890 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 ANXA11P50995 505 aaKnown RBP6.42□□□□□ -1.38
GYPA-205ENST00000508337 CACNB3P54284 484 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 GPSM2P81274 684 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 KLF10Q13118 480 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 CYP2A13Q16696 494 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 AMOTQ4VCS5 1084 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 SLC44A4Q53GD3 710 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 HSP90AB2PQ58FF8 381 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 LAIR1Q6GTX8 287 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 B3GNT9Q6UX72 402 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 ZNF783Q6ZMS7 281 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 RHOUQ7L0Q8 258 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 B3GALNT2Q8NCR0 500 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 FAM46DQ8NEK8 389 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 ASB10Q8WXI3 467 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 RUNDC1Q96C34 613 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 MOGAT1Q96PD6 335 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 ADAM2Q99965 735 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 GPR35Q9HC97 309 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 INTS13Q9NVM9 706 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 GABBR1Q9UBS5 961 aa6.42□□□□□ -1.38
GYPA-205ENST00000508337 A0A1W2PS29 197 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 MGEA5O60502 916 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 UNC5CO95185 931 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 GRPP07492 148 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 ZFP36P26651 326 aaKnown RBP6.41□□□□□ -1.38
GYPA-205ENST00000508337 ZEB1P37275 1124 aaPredicted RBP6.41□□□□□ -1.38
GYPA-205ENST00000508337 NPTX2P47972 431 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 INHBCP55103 352 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 POU6F2P78424 691 aaPredicted RBP6.41□□□□□ -1.38
GYPA-205ENST00000508337 ERCC6LQ2NKX8 1250 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 CD300EQ496F6 205 aaPredicted RBP6.41□□□□□ -1.38
GYPA-205ENST00000508337 CRB2Q5IJ48 1285 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 HECTD2Q5U5R9 776 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 NPNTQ6UXI9 565 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 MRGPRGQ86SM5 289 aa6.41□□□□□ -1.38
GYPA-205ENST00000508337 USP37Q86T82 979 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms