RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 TRAIPQ9BWF2 469 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 RIOX1Q9H6W3 641 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 BARHL2Q9NY43 387 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 ZNF180Q9UJW8 692 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PCDHA1Q9Y5I3 950 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PPP2R3BQ9Y5P8 575 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 A0A088AWK7 358 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 CCDC194A0A1B0GVG4 234 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 NDC80O14777 642 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 ZBTB5O15062 677 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 GSC2O15499 205 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 BUD23O43709 281 aaKnown RBP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 TLR2O60603 784 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 MAGEC1O60732 1142 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 DNAJC6O75061 913 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 CSDE1O75534 798 aaKnown RBP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PYGMP11217 842 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PTPN2P17706 415 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PTPRAP18433 802 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PTGIRP43119 386 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 KCNC4Q03721 635 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 RELAQ04206 551 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 ITGA7Q13683 1181 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 VGLL4Q14135 290 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 DEPDC1Q5TB30 811 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 ANKRD40Q6AI12 368 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 DSTYKQ6XUX3 929 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 RRAGAQ7L523 313 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PATL1Q86TB9 770 aaKnown RBP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PDSS2Q86YH6 399 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 BLIDQ8IZY5 108 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 SYCE1Q8N0S2 351 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 OTUD5Q96G74 571 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 ZFRQ96KR1 1074 aaKnown RBP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PCMTD1Q96MG8 357 aaPredicted RBP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 NT5C3AQ9H0P0 336 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PRR12Q9ULL5 1215 aa6.48□□□□□ -1.37
KDM3B-204ENST00000507996 HBS1LQ9Y450 684 aaKnown RBP6.48□□□□□ -1.37
KDM3B-204ENST00000507996 PNMA6FA0A0J9YX94 578 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 BOLA2-SMG1P6H3BVE0 249 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 EIF3FO00303 357 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PPP1R11O60927 126 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PDE5AO76074 875 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ZCCHC18P0CG32 403 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ITGA4P13612 1032 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 RPL5P46777 297 aaKnown RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 IREB2P48200 963 aaKnown RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 GALK1P51570 392 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ARFIP2P53365 341 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ARHGAP4P98171 946 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 DR1Q01658 176 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PDE4DQ08499 809 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 CDC16Q13042 620 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 KIF22Q14807 665 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ZNF174Q15697 407 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 IL17AQ16552 155 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 UBE2SQ16763 222 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 HSP90AA5PQ58FG0 334 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 TTC38Q5R3I4 469 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 TMCO4Q5TGY1 634 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 IL23RQ5VWK5 629 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 CENPPQ6IPU0 288 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 C1orf228Q6PIY5 440 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 NANOGNBQ7Z5D8 188 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 NET1Q7Z628 596 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PHLDB2Q86SQ0 1253 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 EXOC8Q8IYI6 725 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ZNF280CQ8ND82 737 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 TPCN2Q8NHX9 752 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 GDAP1Q8TB36 358 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 CTNNBL1Q8WYA6 563 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ARHGEF2Q92974 986 aaKnown RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 GMCL1Q96IK5 515 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PITPNM3Q9BZ71 974 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 AS3MTQ9HBK9 375 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 C6orf50Q9HD87 102 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 DISC1Q9NRI5 854 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 TMEM260Q9NX78 707 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 MTRF1LQ9UGC7 380 aaKnown RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 RASAL2Q9UJF2 1139 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PADI4Q9UM07 663 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PCDHA4Q9UN74 947 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PACSIN2Q9UNF0 486 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 PODXLO00592 558 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 EDF1O60869 148 aaKnown RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 FGFR1OPO95684 399 aaKnown RBP6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ANPEPP15144 967 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 HSPA6P17066 643 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 CALML3P27482 149 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 FOXN2P32314 431 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 MCM7P33993 719 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 ARPC4P59998 168 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 KLHDC10Q6PID8 442 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 UGT2A3Q6UWM9 527 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 IZUMO2Q6UXV1 221 aa6.47□□□□□ -1.37
KDM3B-204ENST00000507996 CYFIP1Q7L576 1253 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms