RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FOSL2P15408 326 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 WARSP23381 471 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 FMO5P49326 533 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 PMS1P54277 932 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 TSPY1Q01534 308 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 GCNT1Q02742 428 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 ITIH3Q06033 890 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 INCA1Q0VD86 236 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 BIRC3Q13489 604 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CAMK1Q14012 370 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CTC1Q2NKJ3 1217 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 ZNF699Q32M78 642 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 ZSCAN23Q3MJ62 389 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 TCP11X2Q5H9J9 407 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 TDRD10Q5VZ19 366 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CD300LGQ6UXG3 332 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 DSTYKQ6XUX3 929 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 TMCO2Q7Z6W1 182 aaPredicted RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 DCP1BQ8IZD4 617 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 LEMD2Q8NC56 503 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 ZNF461Q8TAF7 563 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 FAM200AQ8TCP9 573 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 C18orf25Q96B23 403 aaPredicted RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CCDC127Q96BQ5 260 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 PABPC5Q96DU9 382 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 SENP8Q96LD8 212 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CNOT6LQ96LI5 555 aaKnown RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CDX2Q99626 313 aaPredicted RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 BCO2Q9BYV7 579 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 GPR62Q9BZJ7 368 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
PDGFC-205ENST00000506880 XYLT2Q9H1B5 865 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 TUBGCP4Q9UGJ1 667 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CDH9Q9ULB4 789 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 AGAP1Q9UPQ3 857 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 NFE2L3Q9Y4A8 694 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 ASB3Q9Y575 518 aa9.08□□□□□ -0.96
PDGFC-205ENST00000506880 CDH23Q9H251 3354 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 ATP8B3O60423 1300 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 PTPRDP23468 1912 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 TRIM49BA6NDI0 452 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 CYB561D2O14569 222 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 ABLIM3O94929 683 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 CXCL14O95715 111 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 FGF19O95750 216 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 GLUD1P00367 558 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 ZNF18P17022 549 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 PIK3CAP42336 1068 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 MTIF2P46199 727 aaKnown RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 TUFMP49411 452 aaKnown RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 NOP14P78316 857 aaKnown RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 KCNH2Q12809 1159 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 GPR17Q13304 367 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 KCNC3Q14003 757 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 STILQ15468 1287 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 PSMD5Q16401 504 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 FILIP1LQ4L180 1135 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 SEZ6Q53EL9 994 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 VARS2Q5ST30 1063 aaKnown RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 C1orf220Q5T0J3 134 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 TCERG1LQ5VWI1 586 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 LRSAM1Q6UWE0 723 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 OR5B17Q8NGF7 314 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 LNX1Q8TBB1 728 aaPredicted RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 SPPL2BQ8TCT7 592 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 MICAL1Q8TDZ2 1067 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 GUCD1Q96NT3 240 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 NECTIN4Q96NY8 510 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 TUBGCP2Q9BSJ2 902 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 PRDM12Q9H4Q4 367 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 TLE6Q9H808 572 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 PLCB1Q9NQ66 1216 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 AVENQ9NQS1 362 aaPredicted RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 TMEM51Q9NW97 253 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 LIMA1Q9UHB6 759 aaKnown RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 AFF4Q9UHB7 1163 aaKnown RBP9.07□□□□□ -0.96
PDGFC-205ENST00000506880 SZT2Q5T011 3432 aa9.07□□□□□ -0.96
PDGFC-205ENST00000506880 CLUHO75153 1309 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 KCNJ18B7U540 433 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 GOLGA6L19H0YKK7 550 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 B4GALT3O60512 393 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 MICAL2O94851 1124 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 HLA-DRAP01903 254 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 KRT19P08727 400 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ATF2P15336 505 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 PFKLP17858 780 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 MAGEA11P43364 429 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 PPP3CAQ08209 521 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 KCNJ12Q14500 433 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 EXOC3L4Q17RC7 722 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms