RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 DENND1BQ6P3S1 775 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 ZNF677Q86XU0 584 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 FAM81BQ96LP2 452 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 APOL6Q9BWW8 343 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 SLC5A4Q9NY91 659 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 CD19P15391 556 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 CTNNA1P35221 906 aaKnown RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 FLT3P36888 993 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 CDR1P51861 262 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 KLHL11Q9NVR0 708 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 AGAP1Q9UPQ3 857 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 AKAP5P24588 427 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 PSEN2P49810 448 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 ADAM17P78536 824 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 SURF1Q15526 300 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 ZNF667Q5HYK9 610 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 TTC27Q6P3X3 843 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 CATSPER4Q7RTX7 472 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 PRELID2Q8N945 189 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 C18orf25Q96B23 403 aaPredicted RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 CALR3Q96L12 384 aaKnown RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 ELOVL4Q9GZR5 314 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 USTQ9Y2C2 406 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 MBLAC1A4D2B0 266 aaPredicted RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 DAPK3O43293 454 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 HCRTO43612 131 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 IL18RAPO95256 599 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 SYF2O95926 243 aaKnown RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 KCNJ1P48048 391 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 RAD23BP54727 409 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 OGDHQ02218 1023 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 ZNF252P-AS1Q0IIN9 211 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 TMEM132DQ14C87 1099 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 DPH6Q7L8W6 267 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 KIF12Q96FN5 646 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 ACAP3Q96P50 834 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 TUBGCP4Q9UGJ1 667 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
LIN54-206ENST00000506560 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
LIN54-206ENST00000506560 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 MCM3P25205 808 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 GGCXP38435 758 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 PHF13Q86YI8 300 aaPredicted RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 IFT20Q8IY31 132 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 BCO2Q9BYV7 579 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 WNT8AQ9H1J5 351 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 AVENQ9NQS1 362 aaPredicted RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 KLK14Q9P0G3 267 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 NRCAMQ92823 1304 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 MIF4GDA9UHW6 222 aaKnown RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 MYO1FO00160 1098 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 PGK1P00558 417 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 IGHA2P01877 340 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 MMP8P22894 467 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 SIX1Q15475 284 aaPredicted RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 SLC4A11Q8NBS3 891 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 ACSF2Q96CM8 615 aaPredicted RBP12.97□□□□□ -0.33
LIN54-206ENST00000506560 APBA2Q99767 749 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 LPIN3Q9BQK8 851 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 NME7Q9Y5B8 376 aa12.97□□□□□ -0.33
LIN54-206ENST00000506560 HAS3O00219 553 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 PIK3R2O00459 728 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 TLR3O15455 904 aaKnown RBP12.96□□□□□ -0.33
LIN54-206ENST00000506560 C6orf222P0C671 652 aaPredicted RBP12.96□□□□□ -0.33
LIN54-206ENST00000506560 RARAP10276 462 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 IGFBP6P24592 240 aaPredicted RBP12.96□□□□□ -0.33
LIN54-206ENST00000506560 RGS2P41220 211 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 EPHB4P54760 987 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 LACTBP83111 547 aaPredicted RBP12.96□□□□□ -0.33
LIN54-206ENST00000506560 HLTFQ14527 1009 aaKnown RBP eCLIP12.96□□□□□ -0.33
LIN54-206ENST00000506560 PTPN20Q4JDL3 420 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 TXNRD3NBQ6F5E7 133 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 PLEKHA7Q6IQ23 1121 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 ZNF410Q86VK4 478 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 TRIB2Q92519 343 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 WNT8BQ93098 351 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 MCEEQ96PE7 176 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 OSBPL7Q9BZF2 842 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 DPP3Q9NY33 737 aa12.96□□□□□ -0.33
LIN54-206ENST00000506560 RRN3P2A6NIE6 340 aa12.96□□□□□ -0.34
LIN54-206ENST00000506560 CCDC188H7C350 402 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms