RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 MRI1Q9BV20 369 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADAM7Q9H2U9 754 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 SMURF2Q9HAU4 748 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 JKAMPQ9P055 326 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 PCDHGB3Q9Y5G1 929 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 NCANO14594 1321 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZMYM3Q14202 1370 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIF27Q86VH2 1401 aa3.84□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIAA0586Q9BVV6 1533 aa3.84□□□□□ -1.8
TRAPPC11-205ENST00000506426 TCRBV7S2A1N4TA0A589 114 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 PMS2P1A4D2B8 440 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 C9orf118A6NHY6 69 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 PRSS29PA6NIE9 313 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 CXorf49A8MYA2 514 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 MYO1CO00159 1063 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 WNT10BO00744 389 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 AREL1O15033 823 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 PJA2O43164 708 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 AMHP03971 560 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 ANXA1P04083 346 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 RARBP10826 455 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 ALAS1P13196 640 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 ADAM8P78325 824 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 HGFACQ04756 655 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 DLX2Q07687 328 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 PPFIA1Q13136 1202 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 NFYCQ13952 458 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 TBR1Q16650 682 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 AMOTQ4VCS5 1084 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM26FQ5R3K3 315 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 CATSPERGQ6ZRH7 1159 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 RNF44Q7L0R7 432 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 FRMD5Q7Z6J6 570 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 RALYLQ86SE5 291 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 MICU3Q86XE3 530 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 PDSS2Q86YH6 399 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 FANCBQ8NB91 859 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 IPCEF1Q8WWN9 437 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 MAML1Q92585 1016 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 MUL1Q969V5 352 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 CEP95Q96GE4 821 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 LCORQ96JN0 433 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 GPHA2Q96T91 129 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 NDC1Q9BTX1 674 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 STK33Q9BYT3 514 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 ENKD1Q9H0I2 346 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 KCNH6Q9H252 994 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 EPC1Q9H2F5 836 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 A1CFQ9NQ94 594 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 TM7SF3Q9NS93 570 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 SLC23A1Q9UHI7 598 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 LZTS1Q9Y250 596 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 NR2E1Q9Y466 385 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 PLEKHM1Q9Y4G2 1056 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 KDM6BO15054 1643 aa3.83□□□□□ -1.8
TRAPPC11-205ENST00000506426 ABCC2Q92887 1545 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 PTPRGP23470 1445 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 UBE2QL1A1L167 161 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 SH3D21A4FU49 640 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 MBD3L4A6NDZ8 208 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 MBD3L3A6NE82 208 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 B5MCH6 92 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 B8ZZF3 427 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 PYCARD-AS1I3L0S3 204 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 ETV2O00321 342 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 POMCP01189 267 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 KLRC1P26715 233 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 PDIA3P30101 505 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 CARSP49589 748 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 CLRN1P58418 232 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 PSMC1P62191 440 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 POU6F2P78424 691 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 PFKFB4Q16877 469 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZACNQ401N2 412 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 VWA3BQ502W6 1294 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZNF529Q6P280 563 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 FBXO38Q6PIJ6 1188 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 MMS22LQ6ZRQ5 1243 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 UNC13DQ70J99 1090 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZNF365Q70YC5 407 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 ANKRD18AQ8IVF6 992 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 CARFQ8N187 725 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 MPP5Q8N3R9 675 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 TEX19Q8NA77 164 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 CCDC150Q8NCX0 1101 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 TRAPPC12Q8WVT3 735 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 TBC1D20Q96BZ9 403 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 GCC1Q96CN9 775 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 PPP1R16BQ96T49 567 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 RMDN3Q96TC7 470 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 SLC38A3Q99624 504 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 TCF25Q9BQ70 676 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 HEPHQ9BQS7 1158 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 STK31Q9BXU1 1019 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 SIK2Q9H0K1 926 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 CHST8Q9H2A9 424 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 IL23AQ9NPF7 189 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 GJB4Q9NTQ9 266 aa3.82□□□□□ -1.8
TRAPPC11-205ENST00000506426 C9orf78Q9NZ63 289 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms