RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 XXYLT1Q8NBI6 393 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 RDH13Q8NBN7 331 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 GOLGA5Q8TBA6 731 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.28
MED28-204ENST00000506409 CCDC34Q96HJ3 373 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 FAM84AQ96KN4 292 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 MYADMQ96S97 322 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.77■□□□□ 0.28
MED28-204ENST00000506409 ITGA11Q9UKX5 1188 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 MAFFQ9ULX9 164 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 INSL5Q9Y5Q6 135 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 SEC24AO95486 1093 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 KRT19P08727 400 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 OR4Q2P0C623 313 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 NTHL1P78549 312 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 DPYDQ12882 1025 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 MYBPC2Q14324 1141 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
MED28-204ENST00000506409 RNF19BQ6ZMZ0 732 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 METTL23Q86XA0 190 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 C12orf56Q8IXR9 622 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 BORCS6Q96GS4 357 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
MED28-204ENST00000506409 TRIOO75962 3097 aa16.76■□□□□ 0.27
MED28-204ENST00000506409 TECTAO75443 2155 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 PTPRJQ12913 1337 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 MYO10Q9HD67 2058 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 EXOC3O60645 756 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 TNNC2P02585 160 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 RBP5P82980 135 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 SIGLEC14Q08ET2 396 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 GPR17Q13304 367 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 DUOXA2Q1HG44 320 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 PABPC1LQ4VXU2 614 aaKnown RBP16.75■□□□□ 0.27
MED28-204ENST00000506409 WSCD1Q658N2 575 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 WDR49Q8IV35 697 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 UBALD2Q8IYN6 164 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 LRRC52Q8N7C0 313 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 PGLYRP2Q96PD5 576 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 KCNK12Q9HB15 430 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 HCFC1R1Q9NWW0 138 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 IGSF9Q9P2J2 1179 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 EPS15L1Q9UBC2 864 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 DNMT3BQ9UBC3 853 aaKnown RBP16.75■□□□□ 0.27
MED28-204ENST00000506409 DOCK6Q96HP0 2047 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 TSC2P49815 1807 aa16.75■□□□□ 0.27
MED28-204ENST00000506409 TMEM221A6NGB7 291 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 M0R296 226 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 DLATP10515 647 aaKnown RBP16.74■□□□□ 0.27
MED28-204ENST00000506409 LAMP2P13473 410 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 COL9A1P20849 921 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 CYP24A1Q07973 514 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 BFSP1Q12934 665 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 PSMD6Q15008 389 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 FMR1NBQ8N0W7 255 aaPredicted RBP16.74■□□□□ 0.27
MED28-204ENST00000506409 THEM5Q8N1Q8 247 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 OR10T2Q8NGX3 314 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 CXorf38Q8TB03 319 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 CCDC127Q96BQ5 260 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 DOCK8Q8NF50 2099 aa16.74■□□□□ 0.27
MED28-204ENST00000506409 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
MED28-204ENST00000506409 KIF20AO95235 890 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 RHOP08100 348 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 PTPN2P17706 415 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 TNNI1P19237 187 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 TWF1Q12792 350 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 DUSP4Q13115 394 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 TDGQ13569 410 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 SCARA3Q6AZY7 606 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 ELMOD1Q8N336 334 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 ITFG1Q8TB96 612 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 TMEM209Q96SK2 561 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 RTP3Q9BQQ7 232 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 CORO1BQ9BR76 489 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 SMOC2Q9H3U7 446 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 CDH7Q9ULB5 785 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 CIZ1Q9ULV3 898 aaPredicted RBP16.73■□□□□ 0.27
MED28-204ENST00000506409 YIPF1Q9Y548 306 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
MED28-204ENST00000506409 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
MED28-204ENST00000506409 MTMR11A4FU01 709 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 PDXKO00764 312 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 HUS1O60921 280 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 VNN2O95498 520 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 FAM160A1Q05DH4 1040 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 MYO1EQ12965 1108 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 KCNB1Q14721 858 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 SLC39A12Q504Y0 691 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 IQCEQ6IPM2 695 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms