RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 BFSP1Q12934 665 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 UVSSAQ2YD98 709 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 PPM1LQ5SGD2 360 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 C12orf76Q8N812 135 aaPredicted RBP17.97■□□□□ 0.47
SNCA-209ENST00000506244 OR5B17Q8NGF7 314 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 ZNF461Q8TAF7 563 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
SNCA-209ENST00000506244 NR2E1Q9Y466 385 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 SCN1AP35498 2009 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 PTPRJQ12913 1337 aa17.97■□□□□ 0.47
SNCA-209ENST00000506244 CCDC195A0A1B0GUA6 201 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 WDR27A2RRH5 827 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 HUS1O60921 280 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 XYLBO75191 536 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 PAPLNO95428 1278 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 POU2F2P09086 479 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 SPATA31D3P0C874 917 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 KRT13P13646 458 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 PSMC2P35998 433 aaKnown RBP17.96■□□□□ 0.47
SNCA-209ENST00000506244 PRCPP42785 496 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 ARPP19P56211 112 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 LRRC63Q05C16 580 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 ENPEPQ07075 957 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 ZCWPW2Q504Y3 356 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 RSPO2Q6UXX9 243 aaPredicted RBP17.96■□□□□ 0.47
SNCA-209ENST00000506244 SPATA31D4Q6ZUB0 917 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 INTS8Q75QN2 995 aaKnown RBP17.96■□□□□ 0.47
SNCA-209ENST00000506244 TRAPPC11Q7Z392 1133 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 THEM5Q8N1Q8 247 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 TMEM86AQ8N2M4 240 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 TRIML1Q8N9V2 468 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 SLC7A14Q8TBB6 771 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 TMC2Q8TDI7 906 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 SMG7Q92540 1137 aaKnown RBP17.96■□□□□ 0.47
SNCA-209ENST00000506244 NECAB3Q96P71 396 aaPredicted RBP17.96■□□□□ 0.47
SNCA-209ENST00000506244 PIDD1Q9HB75 910 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 SIX4Q9UIU6 781 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 MAN1B1Q9UKM7 699 aa17.96■□□□□ 0.47
SNCA-209ENST00000506244 TIMM13Q9Y5L4 95 aaPredicted RBP17.96■□□□□ 0.47
SNCA-209ENST00000506244 A0A0C4DFX4 3053 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 TNFRSF10AO00220 468 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 PRRG1O14668 218 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 CETN3O15182 167 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 RFPL2O75678 378 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 ABLIM3O94929 683 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 EPB41P11171 864 aaKnown RBP17.95■□□□□ 0.46
SNCA-209ENST00000506244 ATF2P15336 505 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 ADAM9Q13443 819 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 TRPC3Q13507 836 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 FAM186BQ8IYM0 893 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 GJD3Q8N144 294 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 TOP6BLQ8N6T0 577 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 CXorf38Q8TB03 319 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 HPDLQ96IR7 371 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 MKNK1Q9BUB5 465 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 PRKD2Q9BZL6 878 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 GDAP2Q9NXN4 497 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 AFF4Q9UHB7 1163 aaKnown RBP17.95■□□□□ 0.46
SNCA-209ENST00000506244 NCOR1O75376 2440 aa17.95■□□□□ 0.46
SNCA-209ENST00000506244 C19orf67A6NJJ6 358 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 LRRIQ3A6PVS8 624 aaPredicted RBP17.94■□□□□ 0.46
SNCA-209ENST00000506244 PHACTR2O75167 634 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 CASP4P49662 377 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 CLDN10P78369 228 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 BIRC3Q13489 604 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 CENPPQ6IPU0 288 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 ADSSL1Q8N142 457 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 DHTKD1Q96HY7 919 aaPredicted RBP17.94■□□□□ 0.46
SNCA-209ENST00000506244 POMKQ9H5K3 350 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 SNX9Q9Y5X1 595 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 DENND4AQ7Z401 1863 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 CUL9Q8IWT3 2517 aa17.94■□□□□ 0.46
SNCA-209ENST00000506244 BICDL2A1A5D9 508 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 IKBKBO14920 756 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 SLC16A3O15427 465 aaKnown RBP17.93■□□□□ 0.46
SNCA-209ENST00000506244 AKAP3O75969 853 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 CLSTN1O94985 981 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 STAU1O95793 577 aaKnown RBP17.93■□□□□ 0.46
SNCA-209ENST00000506244 LRG1P02750 347 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 ATICP31939 592 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 VAMP7P51809 220 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 FKBP3Q00688 224 aaKnown RBP17.93■□□□□ 0.46
SNCA-209ENST00000506244 MYL7Q01449 175 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 TSPY1Q01534 308 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 SMARCB1Q12824 385 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 GPR17Q13304 367 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 MORC3Q14149 939 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 WSCD1Q658N2 575 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 TCEAL8Q8IYN2 117 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 ADGRF2Q8IZF7 708 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 TDRD5Q8NAT2 981 aaKnown RBP17.93■□□□□ 0.46
SNCA-209ENST00000506244 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
SNCA-209ENST00000506244 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
SNCA-209ENST00000506244 BORCS6Q96GS4 357 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 FAM84AQ96KN4 292 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 RPGRIP1Q96KN7 1286 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 GZF1Q9H116 711 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms