RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
NR1I3-222ENST00000506018 PANK2Q9BZ23 570 aa11.28□□□□□ -0.6
NR1I3-222ENST00000506018 TNMDQ9H2S6 317 aa11.28□□□□□ -0.6
NR1I3-222ENST00000506018 DPP3Q9NY33 737 aa11.28□□□□□ -0.6
NR1I3-222ENST00000506018 TBC1D7Q9P0N9 293 aa11.28□□□□□ -0.6
NR1I3-222ENST00000506018 R3HCC1Q9Y3T6 440 aaKnown RBP11.28□□□□□ -0.6
NR1I3-222ENST00000506018 TSC2P49815 1807 aa11.27□□□□□ -0.6
NR1I3-222ENST00000506018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-222ENST00000506018 H0Y858 1186 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.61
NR1I3-222ENST00000506018 CUTAO60888 179 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 ECI2O75521 394 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 PPP1R37O75864 691 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 FGF19O95750 216 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 NFICP08651 508 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 GARTP22102 1010 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 PNPLA4P41247 253 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 PRKCQQ04759 706 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 TWF1Q12792 350 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 GPR17Q13304 367 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 SV2CQ496J9 727 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 RNF19BQ6ZMZ0 732 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 CCDC105Q8IYK2 499 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 IQUBQ8NA54 791 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 MCRS1Q96EZ8 462 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.61
NR1I3-222ENST00000506018 GPR88Q9GZN0 384 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 MAGEF1Q9HAY2 307 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 HSFX1Q9UBD0 423 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 CFAP45Q9UL16 551 aa11.27□□□□□ -0.61
NR1I3-222ENST00000506018 TIMM13Q9Y5L4 95 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-222ENST00000506018 FRMD3A2A2Y4 597 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 KRBA1A5PL33 1030 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 PIRO00625 290 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 SEC24AO95486 1093 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 ZSCAN22P10073 491 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-222ENST00000506018 NPR3P17342 541 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 TIE1P35590 1138 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 GUCY2FP51841 1108 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 SMARCB1Q12824 385 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 VEPH1Q14D04 833 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 ITIH5Q86UX2 942 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 DTWD2Q8NBA8 298 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 NOC3LQ8WTT2 800 aaKnown RBP11.26□□□□□ -0.61
NR1I3-222ENST00000506018 C2orf15Q8WU43 125 aaKnown RBP11.26□□□□□ -0.61
NR1I3-222ENST00000506018 ELSPBP1Q96BH3 223 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 KXD1Q9BQD3 176 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 FAM213AQ9BRX8 229 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 ZFP14Q9HCL3 533 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 FAM13BQ9NYF5 915 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 RBAKQ9NYW8 714 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-222ENST00000506018 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 YIPF1Q9Y548 306 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 ASB3Q9Y575 518 aa11.26□□□□□ -0.61
NR1I3-222ENST00000506018 ZNF638Q14966 1978 aaKnown RBP11.25□□□□□ -0.61
NR1I3-222ENST00000506018 ANO9A1A5B4 782 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 TISP43B9A030 160 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 CYB561D2O14569 222 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 EXTL3O43909 919 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 CYP11A1P05108 521 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 MYL4P12829 197 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 CEBPBP17676 345 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 ME1P48163 572 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
NR1I3-222ENST00000506018 GPC5P78333 572 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 ASIC1P78348 528 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 SURF1Q15526 300 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 MLF2Q15773 248 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-222ENST00000506018 TAF12Q16514 161 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 SLC5A9Q2M3M2 681 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 PRSS36Q5K4E3 855 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 BRSK2Q8IWQ3 736 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 GPD1LQ8N335 351 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 E2F7Q96AV8 911 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 DHX58Q96C10 678 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 PGLYRP2Q96PD5 576 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 STRA6Q9BX79 667 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 FAM86C1Q9NVL1 165 aa11.25□□□□□ -0.61
NR1I3-222ENST00000506018 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
NR1I3-222ENST00000506018 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
NR1I3-222ENST00000506018 KANSL1LA0AUZ9 987 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 MTMR11A4FU01 709 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 KPNA7A9QM74 516 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 PPEF2O14830 753 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 NCAM2O15394 837 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 PI15O43692 258 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 F13A1P00488 732 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 OR4Q2P0C623 313 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 TMEM191BP0C7N4 346 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 ADSSP30520 456 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 MAGEA9P43362 315 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 EPHA5P54756 1037 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 STARD6P59095 220 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 TFAMQ00059 246 aaKnown RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 TSPY1Q01534 308 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 DUSP4Q13115 394 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms