RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 WDR35Q9P2L0 1181 aa18.36■□□□□ 0.53
TRAPPC11-204ENST00000505676 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 ECHS1P30084 290 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 CYP2C19P33261 490 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 TMEM132DQ14C87 1099 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 MARCH8Q5T0T0 291 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 JAMLQ86YT9 394 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 KATNAL2Q8IYT4 538 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 KIAA0319LQ8IZA0 1049 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 C1orf127Q8N9H9 656 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 GRK7Q8WTQ7 553 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 SOCS4Q8WXH5 440 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 ELMO3Q96BJ8 720 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 GDAP1L1Q96MZ0 367 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 ANK1P16157 1881 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 VTNP04004 478 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 MARCKSL1P49006 195 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 CPT1AP50416 773 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 RBP5P82980 135 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 MMS22LQ6ZRQ5 1243 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 KATNAL1Q9BW62 490 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 MIS12Q9H081 205 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 GNEQ9Y223 722 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-204ENST00000505676 MBLAC1A4D2B0 266 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 TLR3O15455 904 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 PIGHQ14442 188 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 JADE1Q6IE81 842 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 ZNF771Q7L3S4 317 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 NIPA2Q8N8Q9 360 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 CEP120Q8N960 986 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 EXD1Q8NHP7 514 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 SIX4Q9UIU6 781 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 PASKQ96RG2 1323 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 CAPN15O75808 1086 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 NFICP08651 508 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 KRT19P08727 400 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 CD58P19256 250 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 COILP38432 576 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 HUNKP57058 714 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 OSTNP61366 133 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 STILQ15468 1287 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 DNAJC24Q6P3W2 148 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 CCDC137Q6PK04 289 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 PASD1Q8IV76 773 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 C3orf20Q8ND61 904 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 FAM76AQ8TAV0 307 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 RBM41Q96IZ5 413 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
TRAPPC11-204ENST00000505676 GOLGA6CA6NDK9 693 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 DAPK3O43293 454 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 FAM153BP0C7A2 387 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 GOLGA6DP0CG33 693 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 RGS2P41220 211 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 PTGIRP43119 386 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 COPS2P61201 443 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 FAM153CQ494X1 144 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 ERICH1Q86X53 443 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 RASAL3Q86YV0 1011 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 DDX27Q96GQ7 796 aaKnown RBP18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 FMO2Q99518 471 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 ERVK-5Q9HDB9 667 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 GOLGA6AQ9NYA3 693 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 MTRF1LQ9UGC7 380 aaKnown RBP18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 CHORDC1Q9UHD1 332 aaPredicted RBP18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 FAM153AQ9UHL3 310 aa18.33■□□□□ 0.53
TRAPPC11-204ENST00000505676 EVPLQ92817 2033 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 TMEM191CA6NGB0 347 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 GUCY2FP51841 1108 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 CXorf38Q8TB03 319 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 FNIP1Q8TF40 1166 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZIM3Q96PE6 472 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 TSPYL1Q9H0U9 437 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 ADAMTS10Q9H324 1103 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 FAM204AQ9H8W3 233 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 NR2E1Q9Y466 385 aa18.33■□□□□ 0.52
TRAPPC11-204ENST00000505676 TCRBV5S1A1TA0A578 114 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 GOLGA6L10A6NI86 522 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 ECEL1O95672 775 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 ITGB3P05106 788 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 BRD2P25440 801 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 MYO1EQ12965 1108 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 SIX1Q15475 284 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 TAF1CQ15572 869 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 WDR72Q3MJ13 1102 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 NOTUMQ6P988 496 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 SLC27A1Q6PCB7 646 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 CROCCP2Q86T23 111 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 USP6NLQ92738 828 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 DDX56Q9NY93 547 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 NXF1Q9UBU9 619 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-204ENST00000505676 CILPO75339 1184 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 CALCAP01258 141 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms