RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TAP1Q03518 808 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 WDR49Q8IV35 697 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 KIAA0319LQ8IZA0 1049 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 DDX56Q9NY93 547 aaKnown RBP14.86□□□□□ -0.03
TCOF1-207ENST00000504761 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 CTIFO43310 598 aaKnown RBP14.86□□□□□ -0.03
TCOF1-207ENST00000504761 KRT10P13645 584 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 SPATA2LQ8IUW3 424 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-207ENST00000504761 SH2D3CQ8N5H7 860 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 PGBD4Q96DM1 585 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 HAUS2Q9NVX0 235 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 KLHL14Q9P2G3 628 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 M0R2N6 131 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 GJB6O95452 261 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 SULT1E1P49888 294 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 ZNF677Q86XU0 584 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 CCDC33Q8N5R6 958 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 ZNF606Q8WXB4 792 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 TYW5A2RUC4 315 aaKnown RBP14.86□□□□□ -0.03
TCOF1-207ENST00000504761 LACTBL1A8MY62 500 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 ANKRD65E5RJM6 399 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 B4GALT5O43286 388 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 HMBSP08397 361 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 TNFSF9P41273 254 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 ROR1Q01973 937 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 IFT88Q13099 833 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 PIGHQ14442 188 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-207ENST00000504761 MFSD10Q14728 455 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 BZW1Q7L1Q6 419 aaKnown RBP14.86□□□□□ -0.03
TCOF1-207ENST00000504761 KDELC2Q7Z4H8 507 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 PCGF5Q86SE9 256 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 JAMLQ86YT9 394 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 DCLK2Q8N568 766 aa14.86□□□□□ -0.03
TCOF1-207ENST00000504761 GIPC1O14908 333 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 ZNF862O60290 1169 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 ACO1P21399 889 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 EIF3BP55884 814 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 DCAF4L1Q3SXM0 396 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 SV2CQ496J9 727 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 ZPBP2Q6X784 338 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 NOP9Q86U38 636 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 ANKMY2Q8IV38 441 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 CALR3Q96L12 384 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 AGAP3Q96P47 875 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 SPON2Q9BUD6 331 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 INTUQ9ULD6 942 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 NUP98P52948 1817 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 CICQ96RK0 1608 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 TARSL2A2RTX5 802 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 RCCD1A6NED2 376 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 CASTOR2A6NHX0 329 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 FARP2O94887 1054 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 NUMBP49757 651 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 DHX34Q14147 1143 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 MEA1Q16626 185 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 FSCN1Q16658 493 aaKnown RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 BBS5Q8N3I7 341 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 MED15Q96RN5 788 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 TAS2R14Q9NYV8 317 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 TROVE2P10155 538 aaKnown RBP eCLIP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 KCTD19Q17RG1 926 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-207ENST00000504761 PID1Q7Z2X4 250 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 RCOR2Q8IZ40 523 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 SLC38A7Q9NVC3 462 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
TCOF1-207ENST00000504761 KCNN4O15554 427 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 PHF2O75151 1096 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ZC3H11AO75152 810 aaKnown RBP eCLIP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 GZMAP12544 262 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 IL9RQ01113 521 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 STILQ15468 1287 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 C6orf118Q5T5N4 469 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 IQSEC1Q6DN90 963 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ABHD15Q6UXT9 468 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 BRSK2Q8IWQ3 736 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 SNF8Q96H20 258 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ZSWIM1Q9BR11 485 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 CARD9Q9H257 536 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 CCDC68Q9H2F9 335 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 C2CD2LO14523 706 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 TRAPPC3O43617 180 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 POMCP01189 267 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 AKR1A1P14550 325 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ACAT1P24752 427 aaKnown RBP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 P3H1Q32P28 736 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 EEF1DP3Q658K8 133 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 PPM1NQ8N819 430 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 CCT6BQ92526 530 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 KIF9Q9HAQ2 790 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 RASA4BC9J798 803 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 RASA4O43374 803 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 APRTP07741 180 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 KCNA2P16389 499 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 PTPN11Q06124 597 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 PSMD6Q15008 389 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 JADE1Q6IE81 842 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 OR5B17Q8NGF7 314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms