RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 PAGE5Q96GU1 130 aa27.41■■□□□ 1.98
PVT1-201ENST00000504719 PCIF1Q9H4Z3 704 aa27.41■■□□□ 1.98
PVT1-201ENST00000504719 GOLGA8IPA6NC78 632 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 GOLGA6L4A6NEF3 574 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 GOLGA8JA6NMD2 632 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 EIF3DO15371 548 aaKnown RBP eCLIP27.4■■□□□ 1.98
PVT1-201ENST00000504719 OR4Q2P0C623 313 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 TAF6P49848 677 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 ARMCX5Q6P1M9 558 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 UNC13DQ70J99 1090 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 RBAKQ9NYW8 714 aaPredicted RBP27.4■■□□□ 1.98
PVT1-201ENST00000504719 NUMBLQ9Y6R0 609 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 MUC6Q6W4X9 2439 aa27.4■■□□□ 1.98
PVT1-201ENST00000504719 KIAA0391O15091 583 aaKnown RBP27.39■■□□□ 1.98
PVT1-201ENST00000504719 VNN2O95498 520 aa27.39■■□□□ 1.98
PVT1-201ENST00000504719 CYP11A1P05108 521 aa27.39■■□□□ 1.98
PVT1-201ENST00000504719 HOXD13P35453 343 aa27.39■■□□□ 1.98
PVT1-201ENST00000504719 EHHADHQ08426 723 aa27.39■■□□□ 1.98
PVT1-201ENST00000504719 MYBPC2Q14324 1141 aa27.39■■□□□ 1.98
PVT1-201ENST00000504719 EPM2AIP1Q7L775 607 aaPredicted RBP27.39■■□□□ 1.98
PVT1-201ENST00000504719 ST13P5Q8NFI4 369 aaPredicted RBP27.39■■□□□ 1.98
PVT1-201ENST00000504719 ZNF507Q8TCN5 953 aa27.39■■□□□ 1.98
PVT1-201ENST00000504719 MRPS23Q9Y3D9 190 aaKnown RBP27.39■■□□□ 1.98
PVT1-201ENST00000504719 SRFP11831 508 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 GPR17Q13304 367 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 SLC5A9Q2M3M2 681 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 FAM26FQ5R3K3 315 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 PARM1Q6UWI2 310 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 NPAS3Q8IXF0 933 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 GPD1LQ8N335 351 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 PRSS33Q8NF86 280 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 FGF14Q92915 247 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 BORCS6Q96GS4 357 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 PRRX2Q99811 253 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 FBXL21Q9UKT6 434 aa27.38■■□□□ 1.97
PVT1-201ENST00000504719 CYB561D2O14569 222 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 TFAMQ00059 246 aaKnown RBP27.37■■□□□ 1.97
PVT1-201ENST00000504719 TWF1Q12792 350 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 NOC3LQ8WTT2 800 aaKnown RBP27.37■■□□□ 1.97
PVT1-201ENST00000504719 CACTINQ8WUQ7 758 aaKnown RBP27.37■■□□□ 1.97
PVT1-201ENST00000504719 ING5Q8WYH8 240 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 CORO1BQ9BR76 489 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 RPP25Q9BUL9 199 aaKnown RBP27.37■■□□□ 1.97
PVT1-201ENST00000504719 MFSD1Q9H3U5 465 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 WNT16Q9UBV4 365 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 DSEQ9UL01 958 aa27.37■■□□□ 1.97
PVT1-201ENST00000504719 WDFY4Q6ZS81 3184 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 ZNF202O95125 648 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 CFHP08603 1231 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 PRSS36Q5K4E3 855 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 MTSS1LQ765P7 747 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 ELMOD1Q8N336 334 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 C1orf127Q8N9H9 656 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 ZNF560Q96MR9 790 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 PGLYRP2Q96PD5 576 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 TMEM209Q96SK2 561 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 CEP72Q9P209 647 aa27.36■■□□□ 1.97
PVT1-201ENST00000504719 PVALEFA0A1B0GWK0 134 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 KPNA7A9QM74 516 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 TULP1O00294 542 aaPredicted RBP27.35■■□□□ 1.97
PVT1-201ENST00000504719 NPR3P17342 541 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 SV2CQ496J9 727 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 ASTLQ6HA08 431 aaPredicted RBP27.35■■□□□ 1.97
PVT1-201ENST00000504719 POTEHQ6S545 545 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 KRBA2Q6ZNG9 492 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 SIX5Q8N196 739 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 ZNF512Q96ME7 567 aaPredicted RBP27.35■■□□□ 1.97
PVT1-201ENST00000504719 CRISPLD1Q9H336 500 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 PDE11AQ9HCR9 933 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 GDE1Q9NZC3 331 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 YIPF1Q9Y548 306 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 UBE4BO95155 1302 aa27.35■■□□□ 1.97
PVT1-201ENST00000504719 MTMR11A4FU01 709 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 TGFB1I1O43294 461 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 CEBPBP17676 345 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 POLR2BP30876 1174 aaKnown RBP27.34■■□□□ 1.97
PVT1-201ENST00000504719 PNPLA4P41247 253 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 NHLH1Q02575 133 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 DUSP4Q13115 394 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 CWF19L1Q69YN2 538 aaKnown RBP27.34■■□□□ 1.97
PVT1-201ENST00000504719 IQCEQ6IPM2 695 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 CENPPQ6IPU0 288 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 METTL23Q86XA0 190 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 TMEM105Q8N8V8 129 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 OR10T2Q8NGX3 314 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 CXorf38Q8TB03 319 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 SCFD1Q8WVM8 642 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 TCEAL4Q96EI5 215 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 MCRS1Q96EZ8 462 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 RTP3Q9BQQ7 232 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 SLC2A4RGQ9NR83 387 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 HSPBP1Q9NZL4 362 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 AGAP1Q9UPQ3 857 aa27.34■■□□□ 1.97
PVT1-201ENST00000504719 ZNF233A6NK53 670 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 ZNF197O14709 1029 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 MICAL2O94851 1124 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 ITGB3P05106 788 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 MYL1P05976 194 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 CCR2P41597 374 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 CLCN5P51795 746 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms