RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FBXO38Q6PIJ6 1188 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 PXKQ7Z7A4 578 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 SNIP1Q8TAD8 396 aaKnown RBP5.68□□□□□ -1.5
NIPBL-204ENST00000504430 DENND1AQ8TEH3 1009 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 BTBD1Q9H0C5 482 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 DDX39AO00148 427 aaKnown RBP5.68□□□□□ -1.5
NIPBL-204ENST00000504430 KIAA0355O15063 1070 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ATP5DP30049 168 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 KCNC1P48547 511 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 CENPAP49450 140 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 RBP5P82980 135 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 GRIK5Q16478 980 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ARHGAP27Q6ZUM4 889 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 KRT74Q7RTS7 529 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 GLRX5Q86SX6 157 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 LINC00346Q8IVM7 164 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ATP11CQ8NB49 1132 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 FBXO18Q8NFZ0 1043 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 BRI3BPQ8WY22 251 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 MAML1Q92585 1016 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 FAM210AQ96ND0 272 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ACAP3Q96P50 834 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ZPBPQ9BS86 351 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 STRA6Q9BX79 667 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 SSU72Q9NP77 194 aaKnown RBP5.68□□□□□ -1.5
NIPBL-204ENST00000504430 GPATCH2Q9NW75 528 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 FAM169AQ9Y6X4 670 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 GOLGA6L3A6NEY3 463 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 WASH4PA8MWX3 477 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 LACTBL1A8MY62 500 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 TMEM233B4DJY2 109 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 AURKAO14965 403 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 DIAPH2O60879 1101 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 RTN2O75298 545 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 C22orf31O95567 290 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 DLDP09622 509 aaKnown RBP5.68□□□□□ -1.5
NIPBL-204ENST00000504430 GNAT2P19087 354 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 TNFRSF8P28908 595 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ID3Q02535 119 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 SP140Q13342 867 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 COG2Q14746 738 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 FLYWCH1Q4VC44 716 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 MRPL14Q6P1L8 145 aaKnown RBP5.68□□□□□ -1.5
NIPBL-204ENST00000504430 FIGNL1Q6PIW4 674 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ZPBP2Q6X784 338 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 USP51Q70EK9 711 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 PLPPR4Q7Z2D5 763 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 LRRC43Q8N309 656 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 RBM14Q96PK6 669 aaKnown RBP5.68□□□□□ -1.5
NIPBL-204ENST00000504430 TTPALQ9BTX7 342 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 KRT23Q9C075 422 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 IL21RQ9HBE5 538 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ZDHHC7Q9NXF8 308 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 PADI4Q9UM07 663 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 ST14Q9Y5Y6 855 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 GPR75-ASB3A0A0A6YYF3 556 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 CCDC196A0A1B0GTZ2 297 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 hCG_1809904A0A1W2PP81 198 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 A0A1W2PPE2 198 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 A0A1W2PR64 198 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 PTGES3LE9PB15 166 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 H0YC42 278 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 UBXN8O00124 270 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 MYO1FO00160 1098 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 AHSGP02765 367 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 GNAT1P11488 350 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 GGCXP38435 758 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 NSUN2Q08J23 767 aaKnown RBP eCLIP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 CATSPEREQ5SY80 951 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 SCARA3Q6AZY7 606 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 GPAT2Q6NUI2 795 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 LETMD1Q6P1Q0 360 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 TSPYL5Q86VY4 417 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 PIGOQ8TEQ8 1089 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 UBASH3BQ8TF42 649 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 GRK7Q8WTQ7 553 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 SYAP1Q96A49 352 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 EDEM3Q9BZQ6 932 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 VPS37BQ9H9H4 285 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 CHCHD3Q9NX63 227 aaKnown RBP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 NINJ2Q9NZG7 142 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 TMPRSS11EQ9UL52 423 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 CLCA2Q9UQC9 943 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 SYNJ2BP-COX16A0A087WUM0 186 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 BCAS2O75934 225 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 REC8O95072 547 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 SLFN14P0C7P3 912 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 MSL3P1P0C860 447 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 GSPT1P15170 499 aaKnown RBP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 GCH1P30793 250 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 MSH2P43246 934 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 CAMK2DQ13557 499 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 KBTBD12Q3ZCT8 623 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 MEX3CQ5U5Q3 659 aaKnown RBP5.67□□□□□ -1.5
NIPBL-204ENST00000504430 OLFM4Q6UX06 510 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 PPP1R3BQ86XI6 285 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 STAMQ92783 540 aa5.67□□□□□ -1.5
NIPBL-204ENST00000504430 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms