RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 AFF4Q9UHB7 1163 aaKnown RBP8.4□□□□□ -1.06
SKP2-203ENST00000504386 DACH1Q9UI36 760 aa8.4□□□□□ -1.06
SKP2-203ENST00000504386 AGAP1Q9UPQ3 857 aa8.4□□□□□ -1.06
SKP2-203ENST00000504386 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
SKP2-203ENST00000504386 PCDHA5Q9Y5H7 936 aa8.4□□□□□ -1.06
SKP2-203ENST00000504386 CDY1Q9Y6F8 540 aa8.4□□□□□ -1.06
SKP2-203ENST00000504386 CCDC195A0A1B0GUA6 201 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 F8W810 466 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 CYB561D2O14569 222 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 CLIC2O15247 247 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 SLC16A3O15427 465 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 PAPLNO95428 1278 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 FGF19O95750 216 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 LRG1P02750 347 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 ITGB3P05106 788 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 C8AP07357 584 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 ALADP13716 330 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 ATF2P15336 505 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 EPCAMP16422 314 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 PTMSP20962 102 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 POLR2BP30876 1174 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 GTF2H1P32780 548 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 HOXD13P35453 343 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 TUFMP49411 452 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 TNNC1P63316 161 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 DLX2Q07687 328 aaPredicted RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 CETN1Q12798 172 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 BFSP1Q12934 665 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 BIRC3Q13489 604 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 CLUL1Q15846 466 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 NFE2Q16621 373 aaPredicted RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 RARS2Q5T160 578 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 CEP135Q66GS9 1140 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 IQCEQ6IPM2 695 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 LILRA6Q6PI73 481 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 SYCE2Q6PIF2 218 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 EFCAB13Q8IY85 973 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 TCEAL8Q8IYN2 117 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 GJD3Q8N144 294 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 TTC39CQ8N584 583 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 TDRD5Q8NAT2 981 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 C3orf58Q8NDZ4 430 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 GLIS3Q8NEA6 775 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 SMG7Q92540 1137 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 CCDC127Q96BQ5 260 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 HPDLQ96IR7 371 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 FAXDC2Q96IV6 333 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 MTMR12Q9C0I1 747 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 S1PR5Q9H228 398 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 FAM124BQ9H5Z6 455 aaPredicted RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
SKP2-203ENST00000504386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.39□□□□□ -1.071e-7■□□□□ 10.1
SKP2-203ENST00000504386 FBXL5Q9UKA1 691 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 TCHHQ07283 1943 aa8.39□□□□□ -1.07
SKP2-203ENST00000504386 BRWD1Q9NSI6 2320 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 RBAK-RBAKDNI3L0D1 243 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 I3L4J1 428 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 DLL1O00548 723 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ZNF197O14709 1029 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 MEFVO15553 781 aaPredicted RBP8.38□□□□□ -1.07
SKP2-203ENST00000504386 TBC1D4O60343 1298 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 N4BP1O75113 896 aaKnown RBP8.38□□□□□ -1.07
SKP2-203ENST00000504386 ABLIM3O94929 683 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 GNA14O95837 355 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 MBD3O95983 291 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 IL9P15248 144 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 RPL17P18621 184 aaKnown RBP8.38□□□□□ -1.07
SKP2-203ENST00000504386 VAMP7P51809 220 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 EPHB3P54753 998 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 CLDN10P78369 228 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ROR1Q01973 937 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ZP2Q05996 745 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 GPR17Q13304 367 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 VEPH1Q14D04 833 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 SGSM1Q2NKQ1 1148 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 CT47A1Q5JQC4 288 aaPredicted RBP8.38□□□□□ -1.07
SKP2-203ENST00000504386 CENPPQ6IPU0 288 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 CD300LGQ6UXG3 332 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 TRAPPC11Q7Z392 1133 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ITIH5Q86UX2 942 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 GLYCTKQ8IVS8 523 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 FAM186BQ8IYM0 893 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ADSSL1Q8N142 457 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 SLC7A14Q8TBB6 771 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 SPPL2BQ8TCT7 592 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 PARD3BQ8TEW8 1205 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 B3GALT6Q96L58 329 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ACBD6Q9BR61 282 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 CXCL16Q9H2A7 254 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 WDR6Q9NNW5 1121 aaKnown RBP8.38□□□□□ -1.07
SKP2-203ENST00000504386 ABCB6Q9NP58 842 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 CACNG4Q9UBN1 327 aa8.38□□□□□ -1.07
SKP2-203ENST00000504386 ZMYM5Q9UJ78 669 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms