RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 DNMT3BQ9UBC3 853 aaKnown RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 USP20Q9Y2K6 914 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 MRPS23Q9Y3D9 190 aaKnown RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 PCDHA10Q9Y5I2 948 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 COL4A3BPQ9Y5P4 624 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 SLC12A7Q9Y666 1083 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 PIAS3Q9Y6X2 628 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 NOTCH4Q99466 2003 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 TPRP12270 2363 aaKnown RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 WDFY3Q8IZQ1 3526 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 GREB1Q4ZG55 1949 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 SF3B1O75533 1304 aaKnown RBP eCLIP4.04□□□□□ -1.764e-7■■■■■ 133.7
USP46-205ENST00000504078 ATXN2Q99700 1313 aaKnown RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 CNTNAP2Q9UHC6 1331 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 MTCL1Q9Y4B5 1905 aaKnown RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 SRRM3A6NNA2 597 aaPredicted RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 CYSRT1A8MQ03 144 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 K7ESF4 209 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 HIP1O00291 1037 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 DCLK1O15075 740 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 MSH4O15457 936 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 MAFGO15525 162 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 EXTL3O43909 919 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TSPAN1O60635 241 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ERLIN2O94905 339 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 KCNK5O95279 499 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ALDH2P05091 517 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 RHOP08100 348 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 SKIP12755 728 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 CPA1P15085 419 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 LIG1P18858 919 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 U2AF2P26368 475 aaKnown RBP eCLIP4.04□□□□□ -1.76
USP46-205ENST00000504078 TKTP29401 623 aaKnown RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 CDC27P30260 824 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 MPLP40238 635 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 VIPR2P41587 438 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 CCR2P41597 374 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ABL2P42684 1182 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 GNAQP50148 359 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 CCR3P51677 355 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ARPP19P56211 112 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 PFKPQ01813 784 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 DSC1Q08554 894 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 AP3B2Q13367 1082 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TARBP2Q15633 366 aaKnown RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 FBLN7Q53RD9 439 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TBCELQ5QJ74 424 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 STXBP5Q5T5C0 1151 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TTC22Q5TAA0 569 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 FAM171A1Q5VUB5 890 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TXNDC11Q6PKC3 985 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 APOA5Q6Q788 366 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 VITQ6UXI7 678 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 RSPO2Q6UXX9 243 aaPredicted RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 ZNF852Q6ZMS4 543 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 WFDC8Q8IUA0 241 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 SMAP1Q8IYB5 467 aaPredicted RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 REXO1Q8N1G1 1221 aaKnown RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 EXOC6Q8TAG9 804 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 FAM3CQ92520 227 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 NELL1Q92832 810 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 MAP4K1Q92918 833 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 NXPE3Q969Y0 559 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 CLDN23Q96B33 292 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 PGBD4Q96DM1 585 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 RSPRY1Q96DX4 576 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ZFYVE19Q96K21 471 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 HHIPQ96QV1 700 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 CORO1BQ9BR76 489 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 LZTS2Q9BRK4 669 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TEKT3Q9BXF9 490 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 TRIM6Q9C030 488 aaPredicted RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 SLITRK6Q9H5Y7 841 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 LMAN1LQ9HAT1 526 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 IFT122Q9HBG6 1241 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 RXFP1Q9HBX9 757 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 FSCN3Q9NQT6 498 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 DNAJB12Q9NXW2 375 aaKnown RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 SNTG2Q9NY99 539 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 VPS54Q9P1Q0 977 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 WRAP73Q9P2S5 460 aaPredicted RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 PARP2Q9UGN5 583 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ADAM28Q9UKQ2 775 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 KLK13Q9UKR3 277 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 INVSQ9Y283 1065 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 RAXQ9Y2V3 346 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 ASPMQ8IZT6 3477 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 KIF26AQ9ULI4 1882 aaPredicted RBP4.04□□□□□ -1.76
USP46-205ENST00000504078 RALGAPA1Q6GYQ0 2036 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 WDR87Q6ZQQ6 2873 aa4.04□□□□□ -1.76
USP46-205ENST00000504078 CHD8Q9HCK8 2581 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 A0A087WWV3 80 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 KLF18A0A0U1RQI7 1052 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 PATE3B3GLJ2 98 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 SLC27A2O14975 620 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 NCAM2O15394 837 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 SLC37A4O43826 429 aa4.03□□□□□ -1.76
USP46-205ENST00000504078 EDIL3O43854 480 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms