RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 HCFC2Q9Y5Z7 792 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
SCLT1-205ENST00000503401 FGFR1OPO95684 399 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 HLA-DRAP01903 254 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ADH1AP07327 375 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 SPATA31D3P0C874 917 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 EPCAMP16422 314 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 PIK3CAP42336 1068 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 MCCD1P59942 119 aaPredicted RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ENPEPQ07075 957 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 MRPL58Q14197 206 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 CTXN3Q4LDR2 81 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 SPATA31D4Q6ZUB0 917 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 EFHBQ8N7U6 833 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 TMEM8AQ9HCN3 771 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 FNIP2Q9P278 1114 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 BARX2Q9UMQ3 279 aaPredicted RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 L1RE1Q9UN81 338 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 POLIQ9UNA4 740 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 MTCL1Q9Y4B5 1905 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 TBX10O75333 385 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 GNA14O95837 355 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 TYMPP19971 482 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 OR1D2P34982 312 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 NDUFV1P49821 464 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 MXI1P50539 228 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 CLCN4P51793 760 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 CDR1P51861 262 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ARPP19P56211 112 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ADAM15Q13444 863 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 CTC1Q2NKJ3 1217 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ZNF699Q32M78 642 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 WDR72Q3MJ13 1102 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ANO6Q4KMQ2 910 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 KRT39Q6A163 491 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 OVOS1Q6IE37 1185 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 SPOPLQ6IQ16 392 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 ZNF280DQ6N043 979 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 PABPC5Q96DU9 382 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 SAMSN1Q9NSI8 373 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 GDAP2Q9NXN4 497 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 NXF1Q9UBU9 619 aaKnown RBP17.72■□□□□ 0.43
SCLT1-205ENST00000503401 FBXL5Q9UKA1 691 aa17.72■□□□□ 0.43
SCLT1-205ENST00000503401 TBC1D4O60343 1298 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 HUS1O60921 280 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 OAZ2O95190 189 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 CYP11A1P05108 521 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 CCDC192P0DO97 292 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 PAX3P23760 479 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 GTF2H1P32780 548 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 LTBRP36941 435 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 CREMQ03060 361 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 KCNC3Q14003 757 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 SOWAHAQ2M3V2 549 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 CT47A1Q5JQC4 288 aaPredicted RBP17.71■□□□□ 0.43
SCLT1-205ENST00000503401 TRIM59Q8IWR1 403 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 SLC22A17Q8WUG5 538 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 SEMA4DQ92854 862 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 TMEM209Q96SK2 561 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 MMS19Q96T76 1030 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 FUCA2Q9BTY2 467 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 NFE2L3Q9Y4A8 694 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 BACE2Q9Y5Z0 518 aa17.71■□□□□ 0.43
SCLT1-205ENST00000503401 H3BQ06 376 aaPredicted RBP17.7■□□□□ 0.42
SCLT1-205ENST00000503401 H7C4K7 107 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 TGM5O43548 720 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 HCRTO43612 131 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 STX10O60499 249 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 GLUD1P00367 558 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 KCNA5P22460 613 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 MARSP56192 900 aaKnown RBP17.7■□□□□ 0.42
SCLT1-205ENST00000503401 TNNC1P63316 161 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 TFF2Q03403 129 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 COL19A1Q14993 1142 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 CLUL1Q15846 466 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 SCARA5Q6ZMJ2 495 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 METTL23Q86XA0 190 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 ENOX1Q8TC92 643 aaKnown RBP17.7■□□□□ 0.42
SCLT1-205ENST00000503401 RTP3Q9BQQ7 232 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 UBE2ZQ9H832 354 aaPredicted RBP17.7■□□□□ 0.42
SCLT1-205ENST00000503401 DSEQ9UL01 958 aa17.7■□□□□ 0.42
SCLT1-205ENST00000503401 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCLT1-205ENST00000503401 LETM1O95202 739 aaPredicted RBP17.69■□□□□ 0.42
SCLT1-205ENST00000503401 ATICP31939 592 aa17.69■□□□□ 0.42
SCLT1-205ENST00000503401 FMO5P49326 533 aa17.69■□□□□ 0.42
SCLT1-205ENST00000503401 ROR1Q01973 937 aa17.69■□□□□ 0.42
SCLT1-205ENST00000503401 SGSM1Q2NKQ1 1148 aa17.69■□□□□ 0.42
SCLT1-205ENST00000503401 PPFIBP1Q86W92 1011 aa17.69■□□□□ 0.42
SCLT1-205ENST00000503401 OSTM1Q86WC4 334 aa17.69■□□□□ 0.42
SCLT1-205ENST00000503401 ADGRF2Q8IZF7 708 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms