RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RHOT2Q8IXI1 618 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 TOP6BLQ8N6T0 577 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 URGCPQ8TCY9 931 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 CTNNBL1Q8WYA6 563 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 MMS19Q96T76 1030 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 GAD1Q99259 594 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ARID3AQ99856 593 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF518BQ9C0D4 1074 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 ISCUQ9H1K1 167 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM161AQ9NX61 479 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 KLK14Q9P0G3 267 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 GUCA1BQ9UMX6 200 aa8.68□□□□□ -1.02
TOPBP1-202ENST00000503338 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 THAP12O43422 761 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 HUS1O60921 280 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 NBNO60934 754 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 EFCAB14O75071 495 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 CILPO75339 1184 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 KIF4AO95239 1232 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 PFKMP08237 780 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 CLTBP09497 229 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 WEE2P0C1S8 567 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 CD58P19256 250 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TLE2Q04725 743 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 FAAP100Q0VG06 881 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TUSC3Q13454 348 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 MBTPS1Q14703 1052 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TRIM60Q495X7 471 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 ACAD10Q6JQN1 1059 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 SCARA5Q6ZMJ2 495 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 NOP9Q86U38 636 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM86AQ8N2M4 240 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 MSANTD4Q8NCY6 345 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 APPL2Q8NEU8 664 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 LNX1Q8TBB1 728 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 DDX1Q92499 740 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 C18orf25Q96B23 403 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM176AQ96HP8 235 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 VCPIP1Q96JH7 1222 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 FAM84AQ96KN4 292 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 NT5C1AQ9BXI3 368 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 MIS12Q9H081 205 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM39AQ9NV64 488 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TUBGCP4Q9UGJ1 667 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 LCMT1Q9UIC8 334 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 TBX21Q9UL17 535 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 PCDHB7Q9Y5E2 793 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 SNX9Q9Y5X1 595 aa8.67□□□□□ -1.02
TOPBP1-202ENST00000503338 NCANO14594 1321 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 CTAGE9A4FU28 777 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 PODXLO00592 558 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 ENPP3O14638 875 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 FTLP02792 175 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 CYP1A1P04798 512 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 MMEP08473 750 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 VDRP11473 427 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 CHRNB2P17787 502 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 NSFP46459 744 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LHX1P48742 406 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SCNN1GP51170 649 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 GUCY2FP51841 1108 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 GALCP54803 685 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 NAP1L1P55209 391 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SNX16P57768 344 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LILRA4P59901 499 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 GPC5P78333 572 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 CENPCQ03188 943 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 TCEAL1Q15170 157 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 CLEC16AQ2KHT3 1053 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SGO2Q562F6 1265 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 NOMO2Q5JPE7 1267 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF569Q5MCW4 686 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LIN9Q5TKA1 542 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 TAF3Q5VWG9 929 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 CNKSR3Q6P9H4 555 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SYT10Q6XYQ8 523 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LIMS2Q7Z4I7 341 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 ABI1Q8IZP0 508 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 RNF169Q8NCN4 708 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM35BQ8NCS4 154 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 GSTCDQ8NEC7 633 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 DBF4BQ8NFT6 615 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SLC20A1Q8WUM9 679 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF606Q8WXB4 792 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 RFFLQ8WZ73 363 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 PAWRQ96IZ0 340 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 TNIP3Q96KP6 325 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 FAM193BQ96PV7 902 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 NAPGQ99747 312 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 MRPL9Q9BYD2 267 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LACRTQ9GZZ8 138 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LHX5Q9H2C1 402 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SNX25Q9H3E2 840 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 SMYD3Q9H7B4 428 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 UVRAGQ9P2Y5 699 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms