RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IMPACTQ9P2X3 320 aa21.85■■□□□ 1.09
CDC42SE2-206ENST00000503291 LUC7L2Q9Y383 392 aaKnown RBP21.85■■□□□ 1.09
CDC42SE2-206ENST00000503291 HUS1O60921 280 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 TPM1P09493 284 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 LINC00271P0C7V0 271 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 COLGALT1Q8NBJ5 622 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 APPL2Q8NEU8 664 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 ZNF397Q8NF99 534 aaPredicted RBP21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 CLP1Q92989 425 aaKnown RBP21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 JAKMIP2Q96AA8 810 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 PDLIM2Q96JY6 352 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 SUSD3Q96L08 255 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 CYP3A43Q9HB55 503 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 FOXN3O00409 490 aaPredicted RBP21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 TRAPPC3O43617 180 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 JAM2P57087 298 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 DPH6Q7L8W6 267 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 LIMS2Q7Z4I7 341 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 BCL7CQ8WUZ0 217 aaPredicted RBP21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 IGSF21Q96ID5 467 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 GPR88Q9GZN0 384 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 AAASQ9NRG9 546 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 L1RE1Q9UN81 338 aa21.84■■□□□ 1.09
CDC42SE2-206ENST00000503291 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 M0QZQ0 153 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 CD58P19256 250 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 KRT9P35527 623 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 ADKP55263 362 aaKnown RBP21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 ZBED6P86452 979 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 GOLGA8FQ08AF8 430 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 GOLGA8DPQ0D2H9 430 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 TDHQ8IZJ6 230 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 TOP6BLQ8N6T0 577 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 SHC3Q92529 594 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 GPR62Q9BZJ7 368 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 CISHQ9NSE2 258 aa21.83■■□□□ 1.09
CDC42SE2-206ENST00000503291 CARNS1A5YM72 827 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 F8VZ95 297 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 PNMA6AP0CW24 399 aaPredicted RBP21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 ACO1P21399 889 aaKnown RBP21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 SLC39A11Q8N1S5 342 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 PDCL2Q8N4E4 241 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 MRPL45Q9BRJ2 306 aaKnown RBP21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 PCDHB12Q9Y5F1 795 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 TIMM13Q9Y5L4 95 aaPredicted RBP21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 LINC01553A4QN01 128 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 LRRC53A6NM62 1247 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 AKR1B15C9JRZ8 316 aaPredicted RBP21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 TACC1O75410 805 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 WSCD1Q658N2 575 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 FUT10Q6P4F1 479 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 UBR7Q8N806 425 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 SPG21Q9NZD8 308 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 PCDHA11Q9Y5I1 949 aa21.82■■□□□ 1.08
CDC42SE2-206ENST00000503291 SF3B1O75533 1304 aaKnown RBP eCLIP21.81■■□□□ 1.083e-7■■■■■ 66.4
CDC42SE2-206ENST00000503291 ODC1P11926 461 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 USP8P40818 1118 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 CHRDL2Q6WN34 429 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 ADGRF2Q8IZF7 708 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 KBTBD7Q8WVZ9 684 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 MYO6Q9UM54 1294 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 PCDHB4Q9Y5E5 795 aa21.81■■□□□ 1.08
CDC42SE2-206ENST00000503291 GOLGA6L6A8MZA4 724 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 MFAP3LO75121 409 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 CA3P07451 260 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 PBX2P40425 430 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 STAT1P42224 750 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 YWHAEP62258 255 aaKnown RBP21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 FAM171A1Q5VUB5 890 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 PDXDC1Q6P996 788 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 TMEM270Q6UE05 265 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 CNGA4Q8IV77 575 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 TC2NQ8N9U0 490 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 TMEM169Q96HH4 297 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 PRO3102Q9H379 93 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 PCDHB8Q9UN66 801 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 LAMA3Q16787 3333 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 ARHGEF15O94989 841 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 CYP11A1P05108 521 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 FAM163BP0C2L3 166 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 KRT5P13647 590 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 SOX5P35711 763 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 INCA1Q0VD86 236 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 ELAVL2Q12926 359 aaKnown RBP21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 FAM71AQ8IYT1 594 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 OR8K1Q8NGG5 319 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 OR6B3Q8NGW1 331 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 FAM124BQ9H5Z6 455 aaPredicted RBP21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 BARX2Q9UMQ3 279 aaPredicted RBP21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 CNTN6Q9UQ52 1028 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 KIAA1671Q9BY89 1806 aa21.8■■□□□ 1.08
CDC42SE2-206ENST00000503291 GBF1Q92538 1859 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 ARHGEF37A1IGU5 675 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 CILPO75339 1184 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 EFEMP2O95967 443 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 PPM1AP35813 382 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 BMPR1AP36894 532 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 GNL1P36915 607 aaPredicted RBP21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 CCDC173Q0VFZ6 552 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms