RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TACC1O75410 805 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 ABLIM3O94929 683 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 DLATP10515 647 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 KRT13P13646 458 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 KLRC2P26717 231 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 TKTP29401 623 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 POLR2BP30876 1174 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 CASP4P49662 377 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 PMS1P54277 932 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 SMAD4Q13485 552 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 CCDC85BQ15834 202 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 CAMK4Q16566 473 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 CEP135Q66GS9 1140 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 ANKRD54Q6NXT1 300 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 CSGALNACT2Q8N6G5 542 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 RDH13Q8NBN7 331 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 VN1R2Q8NFZ6 395 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 PLEKHO2Q8TD55 490 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 SUSD6Q92537 303 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 SYAP1Q96A49 352 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 XYLT2Q9H1B5 865 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 SFXN1Q9H9B4 322 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 CLDND1Q9NY35 253 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 FBXW11Q9UKB1 542 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 AGAP1Q9UPQ3 857 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 TSC2P49815 1807 aa11.55□□□□□ -0.56
UBE2D3-212ENST00000502563 MTCL1Q9Y4B5 1905 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 PPEF2O14830 753 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 PER2O15055 1255 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 P4HA2O15460 535 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 TGM5O43548 720 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 HNRNPA1P09651 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 ATF2P15336 505 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 GTF2F1P35269 517 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■□□ 14.6
UBE2D3-212ENST00000502563 LHX1P48742 406 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 GUCY2FP51841 1108 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 NLRP12P59046 1061 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 SKIV2LQ15477 1246 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 KLHL40Q2TBA0 621 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 C1orf220Q5T0J3 134 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 CCDC183Q5T5S1 534 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 OVOS1Q6IE37 1185 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 DSTYKQ6XUX3 929 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 RBM23Q86U06 439 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 C2orf15Q8WU43 125 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 NELFBQ8WX92 580 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 AUTS2Q8WXX7 1259 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 ZNF516Q92618 1163 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 CCDC127Q96BQ5 260 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 NECTIN4Q96NY8 510 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 ASB2Q96Q27 587 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 DUSP9Q99956 384 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 S1PR5Q9H228 398 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 ADAM7Q9H2U9 754 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 TMEM8AQ9HCN3 771 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 CD207Q9UJ71 328 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 COQ4Q9Y3A0 265 aa11.54□□□□□ -0.56
UBE2D3-212ENST00000502563 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 CYB561D2O14569 222 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 KCNA5P22460 613 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 ROR1Q01973 937 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 GPR17Q13304 367 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 TJAP1Q5JTD0 557 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 KRT39Q6A163 491 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 SYCE2Q6PIF2 218 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 PRSS55Q6UWB4 352 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 CCDC149Q6ZUS6 474 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 SV2AQ7L0J3 742 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 METTL23Q86XA0 190 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 TCEAL8Q8IYN2 117 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 SLC35C1Q96A29 364 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 CEP295NLQ96MC4 621 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 ARMCX3Q9UH62 379 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 AFF4Q9UHB7 1163 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 FBXL5Q9UKA1 691 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 CDY1Q9Y6F8 540 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 UNC80Q8N2C7 3258 aa11.53□□□□□ -0.56
UBE2D3-212ENST00000502563 WDR27A2RRH5 827 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 TRIM49BA6NDI0 452 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 BIN1O00499 593 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 C2CD2LO14523 706 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 LINC01565O15544 149 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 MBTPS2O43462 519 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 HUS1O60921 280 aa11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 N4BP1O75113 896 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-212ENST00000502563 ZMYND10O75800 440 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms