RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ZMYND10O75800 440 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ZSWIM7Q19AV6 140 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 GADL1Q6ZQY3 521 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 NLRP14Q86W24 1093 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ATP6V1G3Q96LB4 118 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 CCDC195A0A1B0GUA6 201 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 CHL1O00533 1208 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 MTSS1O43312 755 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 FBLN1P23142 703 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 DCPSQ96C86 337 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 FAM210AQ96ND0 272 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF624Q9P2J8 865 aaPredicted RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ENO1P06733 434 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 POLNQ7Z5Q5 900 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ZFRQ96KR1 1074 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 THTPAQ9BU02 230 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 NCOA5Q9HCD5 579 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 POLR1DQ9Y2S0 133 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 SEMA3EO15041 775 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 PSAPP07602 524 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 VCLP18206 1134 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 C4orf22Q6V702 233 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 LCORLQ8N3X6 602 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 PNMA1Q8ND90 353 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 MCPH1Q8NEM0 835 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 UBASH3BQ8TF42 649 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 MYL4P12829 197 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 MAGEA2P43356 314 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 HNRNPH2P55795 449 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ILF2Q12905 390 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 TRIP13Q15645 432 aaPredicted RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 USP15Q9Y4E8 981 aaPredicted RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ANO9A1A5B4 782 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 SMIM22K7EJ46 135 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 KPNA5O15131 536 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 KLHL41O60662 606 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 LRPAP1P30533 357 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 PTK6Q13882 451 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 KRT31Q15323 416 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 FAM153AQ9UHL3 310 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 POLA2Q14181 598 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF786Q8N393 782 aa11.67□□□□□ -0.54
AC055713.1-201ENST00000498967 CLCN6P51797 869 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TYW3Q6IPR3 259 aaKnown RBP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 CLYBLQ8N0X4 340 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 BEST2Q8NFU1 509 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 CYFIP2Q96F07 1278 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 FBXO28Q9NVF7 368 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 KIAA0232Q92628 1395 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 DGKKQ5KSL6 1271 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 WNK4Q96J92 1243 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF112Q9UJU3 913 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 PCDHGA3Q9Y5H0 932 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TRIM49BA6NDI0 452 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TRIM49D1C9J1S8 452 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 CLPTM1O96005 669 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TCF4P15884 667 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 YY1P25490 414 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ALDH18A1P54886 795 aaKnown RBP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ARPP19P56211 112 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 SV2CQ496J9 727 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 PIK3C3Q8NEB9 887 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 A0A087X0T9 212 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ARF3P61204 181 aaPredicted RBP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ARF1P84077 181 aaKnown RBP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 GNA13Q14344 377 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 GALNT4Q8N4A0 578 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 PTPRN2Q92932 1015 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 FAM92AA1XBS5 289 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TRIM43BA6NCK2 446 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 PRODHO43272 600 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TRAPPC3O43617 180 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ACLYP53396 1101 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF699Q32M78 642 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 HAUS6Q7Z4H7 955 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 VN1R5Q7Z5H4 357 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 RHOT1Q8IXI2 618 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 FICDQ9BVA6 458 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 SYNDIG1Q9H7V2 258 aa11.66□□□□□ -0.54
AC055713.1-201ENST00000498967 TCHHQ07283 1943 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms