RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 ACOT2P49753 483 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 KRT83P78385 493 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 BEX3Q00994 111 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 ZACNQ401N2 412 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 SLC9C1Q4G0N8 1177 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 EFHC2Q5JST6 749 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 IQCEQ6IPM2 695 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 TAF2Q6P1X5 1199 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 SV2AQ7L0J3 742 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 IRF2BP2Q7Z5L9 587 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 RPAINQ86UA6 219 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 C7orf31Q8N865 590 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 FBXL13Q8NEE6 735 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 CCDC127Q96BQ5 260 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
CDC42-205ENST00000498236 CCDC42Q96M95 316 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 SPAG5Q96R06 1193 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 FNBP1Q96RU3 617 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 CGRRF1Q99675 332 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 GCOM2Q9BZD3 368 aaPredicted RBP8.26□□□□□ -1.09
CDC42-205ENST00000498236 NIF3L1Q9GZT8 377 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 NLRC4Q9NPP4 1024 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 XPNPEP3Q9NQH7 507 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 TRMT1Q9NXH9 659 aaKnown RBP8.26□□□□□ -1.09
CDC42-205ENST00000498236 ARHGAP20Q9P2F6 1191 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 CPSF3Q9UKF6 684 aaKnown RBP8.26□□□□□ -1.09
CDC42-205ENST00000498236 FHOD1Q9Y613 1164 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 SCN10AQ9Y5Y9 1956 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 MYADML2A6NDP7 307 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 F8VZ95 297 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 B4GALT5O43286 388 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 B4GALT4O60513 344 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 TSPAN1O60635 241 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 CABYRO75952 493 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 IL18RAPO95256 599 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 IPO7O95373 1038 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 CLTAP09496 248 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 CCDC172P0C7W6 258 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 DARSP14868 501 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 ELNP15502 786 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 EPB42P16452 691 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 FERP16591 822 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 CCND3P30281 292 aaPredicted RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 AXLP30530 894 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 SOX5P35711 763 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 STAT1P42224 750 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.096e-7■■■■□ 22.3
CDC42-205ENST00000498236 MAPK8P45983 427 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 APBA1Q02410 837 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 LBRQ14739 615 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 ASIC2Q16515 512 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 ZNF568Q3ZCX4 644 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 ZBTB41Q5SVQ8 909 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 ENOSF1Q7L5Y1 443 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 APBB1IPQ7Z5R6 666 aaPredicted RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 WDR49Q8IV35 697 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 TXLNBQ8N3L3 684 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 PCSK9Q8NBP7 692 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 RAET1EQ8TD07 263 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 DESI2Q9BSY9 194 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 TCHPQ9BT92 498 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 GPR88Q9GZN0 384 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 CDT1Q9H211 546 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 PDZD7Q9H5P4 517 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 PDE11AQ9HCR9 933 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 RAB20Q9NX57 234 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 HDAC6Q9UBN7 1215 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 DDX20Q9UHI6 824 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 GTF2IRD1Q9UHL9 959 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 DNAJC12Q9UKB3 198 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 FNDC3AQ9Y2H6 1198 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 REXO2Q9Y3B8 237 aaKnown RBP8.25□□□□□ -1.09
CDC42-205ENST00000498236 EVPLQ92817 2033 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 ATP8B3O60423 1300 aa8.25□□□□□ -1.09
CDC42-205ENST00000498236 KAT6AQ92794 2004 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 ERLIN2O94905 339 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 PGK1P00558 417 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 DLATP10515 647 aaKnown RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 TNNT1P13805 278 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 ARF4P18085 180 aaPredicted RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 TNNI1P19237 187 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 HOXA11P31270 313 aaPredicted RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 EIF4A3P38919 411 aaKnown RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 KIF11P52732 1056 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 CRYBB1P53674 252 aaPredicted RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 MFAP3P55082 362 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 ETF1P62495 437 aaKnown RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 TAGLNQ01995 201 aaKnown RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 GCNT1Q02742 428 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 MAP2K1Q02750 393 aaPredicted RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 PTPN11Q06124 597 aaPredicted RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 NCBP1Q09161 790 aaKnown RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 KLHL30Q0D2K2 578 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 RAPGEF1Q13905 1077 aa8.24□□□□□ -1.09
CDC42-205ENST00000498236 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
CDC42-205ENST00000498236 SPA17Q15506 151 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms