RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 GPR17Q13304 367 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 PTPAQ15257 358 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 FAM78AQ5JUQ0 283 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 C9orf57Q5W0N0 161 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 ZNF852Q6ZMS4 543 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 DYMQ7RTS9 669 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 ZNF720Q7Z2F6 126 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 METTL23Q86XA0 190 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SFR1Q86XK3 245 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 TMEM130Q8N3G9 435 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 POMGNT1Q8WZA1 660 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SMARCD2Q92925 531 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SENP8Q96LD8 212 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 TRMT61BQ9BVS5 477 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 GPR88Q9GZN0 384 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SLITRK6Q9H5Y7 841 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 BRD9Q9H8M2 597 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 MRPL44Q9H9J2 332 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 LTB4R2Q9NPC1 389 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SPATA6Q9NWH7 488 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 DSEQ9UL01 958 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 EXOC7Q9UPT5 735 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 C2CD2Q9Y426 696 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 SRPRBQ9Y5M8 271 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 STYXL1Q9Y6J8 313 aa12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 ZFHX2Q9C0A1 2572 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-211ENST00000497978 PIRO00625 290 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 PPEF2O14830 753 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 LAMTOR5O43504 91 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 LRRN2O75325 713 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 LMNAP02545 664 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 GLULP15104 373 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 GAP43P17677 238 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 PSMC3P17980 439 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 SYT1P21579 422 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 CD72P21854 359 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 FCARP24071 287 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 EPHA5P54756 1037 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 DUSP4Q13115 394 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 GRM2Q14416 872 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 DEPDC1BQ8WUY9 529 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 IRF7Q92985 503 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 E2F7Q96AV8 911 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 HEBP1Q9NRV9 189 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 MTF2Q9Y483 593 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 ASB3Q9Y575 518 aa12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-211ENST00000497978 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 TULP1O00294 542 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 MAN2B1O00754 1011 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 IL18RAPO95256 599 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 FGF19O95750 216 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 TAF6P49848 677 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 RESTQ13127 1097 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 TEAD2Q15562 447 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 CENPPQ6IPU0 288 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 CCDC73Q6ZRK6 1079 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 THEM5Q8N1Q8 247 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 INTS4Q96HW7 963 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 ZSWIM3Q96MP5 696 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 ACCSQ96QU6 501 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 DPP3Q9NY33 737 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 HSFX1Q9UBD0 423 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 R4GN57 208 aa12.72□□□□□ -0.37
NUDCD3-211ENST00000497978 MTMR11A4FU01 709 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 MYMKA6NI61 221 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 TISP43B9A030 160 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 CYB561D2O14569 222 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 ZNF263O14978 683 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 SPTLC1O15269 473 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 MOSPD3O75425 235 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 GCNT3O95395 438 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 VNN2O95498 520 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 CYP11A1P05108 521 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 IDEP14735 1019 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 GJA1P17302 382 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 GDI1P31150 447 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 STAT6P42226 847 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 TUFMP49411 452 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 SMARCB1Q12824 385 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 ALCAMQ13740 583 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms