RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SLC24A5Q71RS6 500 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 UBR7Q8N806 425 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 KAT5Q92993 513 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.03
VPS26A-209ENST00000497564 NIF3L1Q9GZT8 377 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 SLC38A7Q9NVC3 462 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 EPN1Q9Y6I3 576 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-209ENST00000497564 MYH10P35580 1976 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 TSC2P49815 1807 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 COL4A6Q14031 1691 aa15.21■□□□□ 0.03
VPS26A-209ENST00000497564 COL4A4P53420 1690 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 EIF3CLB5ME19 914 aaKnown RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 PTGESO14684 152 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 CCP110O43303 1012 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF500O60304 480 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 GFPT2O94808 682 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 NDUFA10O95299 355 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 PLEKP08567 350 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 KLHL30Q0D2K2 578 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 MTF1Q14872 753 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 PPM1EQ8WY54 764 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 CCDC42Q96M95 316 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 GAS2L1Q99501 681 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 EIF3CQ99613 913 aaKnown RBP15.2■□□□□ 0.02
VPS26A-209ENST00000497564 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 SYT11Q9BT88 431 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 BCO2Q9BYV7 579 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 PRDM6Q9NQX0 595 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
VPS26A-209ENST00000497564 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 MEIS3P2A8K0S8 358 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 PIRO00625 290 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 LPXNO60711 386 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 KRT19P08727 400 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 ACO1P21399 889 aaKnown RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 LRPAP1P30533 357 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 YWHAEP62258 255 aaKnown RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 NAB2Q15742 525 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 CCDC85BQ15834 202 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 TDRD12Q587J7 1177 aaKnown RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 GLRA4Q5JXX5 417 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 C9orf57Q5W0N0 161 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 TOGARAM2Q6ZUX3 1019 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 CRIPAKQ8N1N5 446 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 GDPD5Q8WTR4 605 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 LPPQ93052 612 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 HPDLQ96IR7 371 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 YME1L1Q96TA2 773 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 HAUS4Q9H6D7 363 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 ELAC1Q9H777 363 aaKnown RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.19■□□□□ 0.029e-9■■■■■ 107.1
VPS26A-209ENST00000497564 SPTLC3Q9NUV7 552 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 TUBGCP4Q9UGJ1 667 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
VPS26A-209ENST00000497564 INSL6Q9Y581 213 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 ADGRG1Q9Y653 693 aa15.19■□□□□ 0.02
VPS26A-209ENST00000497564 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 CCDC175P0C221 793 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 PNMA6AP0CW24 399 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-209ENST00000497564 P4HA1P13674 534 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 CLCN1P35523 988 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 MLH1P40692 756 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 PNPLA4P41247 253 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ASPAP45381 313 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 GATMP50440 423 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 KIF11P52732 1056 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ARID5AQ03989 594 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 PTK2Q05397 1052 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF571Q7Z3V5 609 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ELMO3Q96BJ8 720 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ZFP42Q96MM3 310 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 GAD1Q99259 594 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ARID3AQ99856 593 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 CYP3A43Q9HB55 503 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 RC3H2Q9HBD1 1191 aaKnown RBP15.18■□□□□ 0.02
VPS26A-209ENST00000497564 PPP2R2CQ9Y2T4 447 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 TTC28Q96AY4 2481 aa15.18■□□□□ 0.02
VPS26A-209ENST00000497564 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 MYO7AQ13402 2215 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 GOLGA6L9A6NEM1 432 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 AKR1B10O60218 316 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 THP07101 528 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF132P52740 706 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms