RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 APEX2Q9UBZ4 518 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 SIK3Q9Y2K2 1263 aa23.32■■□□□ 1.32
C9orf3-222ENST00000496567 H3BNC9 293 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 METTL23Q86XA0 190 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 PPM1KQ8N3J5 372 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 TTPALQ9BTX7 342 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 HERC2P3Q9BVR0 1158 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 LSM14BQ9BX40 385 aaKnown RBP23.31■■□□□ 1.32
C9orf3-222ENST00000496567 CERS4Q9HA82 394 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 CYP3A43Q9HB55 503 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 ALG13Q9NP73 1137 aaKnown RBP23.31■■□□□ 1.32
C9orf3-222ENST00000496567 POLIQ9UNA4 740 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 CYP11A1P05108 521 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 FGFR3P22607 806 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 ASPAP45381 313 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 GCNT1Q02742 428 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 GPM6BQ13491 265 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 BMS1Q14692 1282 aaKnown RBP23.31■■□□□ 1.32
C9orf3-222ENST00000496567 SOWAHAQ2M3V2 549 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 KIAA1841Q6NSI8 718 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 PHLDB3Q6NSJ2 640 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 LIMS2Q7Z4I7 341 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 CEP57Q86XR8 500 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 VPS52Q8N1B4 723 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 SPATA18Q8TC71 538 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 SPPL3Q8TCT6 385 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 VN1R3Q9BXE9 311 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 BCO2Q9BYV7 579 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 FAM124BQ9H5Z6 455 aaPredicted RBP23.31■■□□□ 1.32
C9orf3-222ENST00000496567 ZNF576Q9H609 170 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 L1RE1Q9UN81 338 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 DAAM1Q9Y4D1 1078 aa23.31■■□□□ 1.32
C9orf3-222ENST00000496567 FSD2A1L4K1 749 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 TACC1O75410 805 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 RFX1P22670 979 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 TKTP29401 623 aaKnown RBP23.3■■□□□ 1.32
C9orf3-222ENST00000496567 CUL2Q13617 745 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 KLHDC7AQ5VTJ3 777 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 PDXDC1Q6P996 788 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 SCARA5Q6ZMJ2 495 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 ENOSF1Q7L5Y1 443 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 TAS1R1Q7RTX1 841 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 PDCL2Q8N4E4 241 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 NEK11Q8NG66 645 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 SIX2Q9NPC8 291 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 CHST7Q9NS84 486 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 LAMA3Q16787 3333 aa23.3■■□□□ 1.32
C9orf3-222ENST00000496567 TRIOBPQ9H2D6 2365 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 GLUD2P49448 558 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 MFAP3P55082 362 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 YWHAEP62258 255 aaKnown RBP23.29■■□□□ 1.32
C9orf3-222ENST00000496567 YWHAHQ04917 246 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-222ENST00000496567 WSCD1Q658N2 575 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 ARHGEF19Q8IW93 802 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 ADGRF2Q8IZF7 708 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 TTC39CQ8N584 583 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 POF1BQ8WVV4 589 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 SMYD3Q9H7B4 428 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 UBE2TQ9NPD8 197 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-222ENST00000496567 FAM207AQ9NSI2 230 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-222ENST00000496567 SSX2IPQ9Y2D8 614 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 TIMM13Q9Y5L4 95 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-222ENST00000496567 PLXNA4Q9HCM2 1894 aa23.29■■□□□ 1.32
C9orf3-222ENST00000496567 AP5Z1O43299 807 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 URODP06132 367 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 PBX1P40424 430 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 LHX1P48742 406 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 KLK7P49862 253 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 OVOS1Q6IE37 1185 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 ANKS3Q6ZW76 656 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 RRAGAQ7L523 313 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 GPR65Q8IYL9 337 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 JAKMIP2Q96AA8 810 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 ZBP1Q9H171 429 aa23.28■■□□□ 1.32
C9orf3-222ENST00000496567 H7C4K7 107 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 GRM6O15303 877 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 CTSAP10619 480 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 APBA1Q02410 837 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 DSG1Q02413 1049 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 RTP2Q5QGT7 225 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 VARS2Q5ST30 1063 aaKnown RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 DPY19L2P1Q6NXN4 242 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 TMC7Q7Z402 723 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 THEM5Q8N1Q8 247 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 LMAN2LQ9H0V9 348 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 SNX25Q9H3E2 840 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 GRPEL1Q9HAV7 217 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 TLR9Q9NR96 1032 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 FBXL5Q9UKA1 691 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 OAZ2O95190 189 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 WEE2P0C1S8 567 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 UCHL3P15374 230 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 TRIM21P19474 475 aaKnown RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 WARSP23381 471 aaKnown RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 CDH8P55286 799 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 SMYD5Q6GMV2 418 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 PDE12Q6L8Q7 609 aaKnown RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 KBTBD7Q8WVZ9 684 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 RIN2Q8WYP3 895 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 PIK3R5Q8WYR1 880 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms