RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PNMA8BQ9ULN7 279 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-212ENST00000496458 PRSS29PA6NIE9 313 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 SUN1O94901 812 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 LMNAP02545 664 aaKnown RBP7.3□□□□□ -1.24
SF3B1-212ENST00000496458 TYRP14679 529 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 BMP5P22003 454 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 MPLP40238 635 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 EPHB1P54762 984 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 RPS7P62081 194 aaKnown RBP7.3□□□□□ -1.24
SF3B1-212ENST00000496458 ATAT1Q5SQI0 421 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 SP5Q6BEB4 398 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-212ENST00000496458 OLFML1Q6UWY5 402 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 ZG16BQ96DA0 208 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 LRIG1Q96JA1 1093 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 TRIB1Q96RU8 372 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 SMOQ99835 787 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 MRPL46Q9H2W6 279 aaKnown RBP7.3□□□□□ -1.24
SF3B1-212ENST00000496458 SLC12A5Q9H2X9 1139 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 KCTD5Q9NXV2 234 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 NEU2Q9Y3R4 380 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 NR2E3Q9Y5X4 410 aa7.3□□□□□ -1.24
SF3B1-212ENST00000496458 H3BUI4 141 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 POLRMTO00411 1230 aaKnown RBP7.29□□□□□ -1.24
SF3B1-212ENST00000496458 AP1G1O43747 822 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 MATN4O95460 622 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 AHSGP02765 367 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 ALDH2P05091 517 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 RARBP10826 455 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 TYRP1P17643 537 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 ADRA1BP35368 520 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 ANXA11P50995 505 aaKnown RBP7.29□□□□□ -1.24
SF3B1-212ENST00000496458 POU6F2P78424 691 aaPredicted RBP7.29□□□□□ -1.24
SF3B1-212ENST00000496458 KIF22Q14807 665 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 SF3B3Q15393 1217 aaKnown RBP7.29□□□□□ -1.24
SF3B1-212ENST00000496458 PPP1R3BQ86XI6 285 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 TPH2Q8IWU9 490 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 ADGRG5Q8IZF4 528 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 LNX2Q8N448 690 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 FAM167AQ96KS9 214 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 LRGUKQ96M69 825 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 CDH19Q9H159 772 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 PNPOQ9NVS9 261 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 ZIM2Q9NZV7 527 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 DMTF1Q9Y222 760 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 PCDHA1Q9Y5I3 950 aa7.29□□□□□ -1.24
SF3B1-212ENST00000496458 DYRK1AQ13627 763 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 PLEKHG6Q3KR16 790 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 RAVER1Q8IY67 606 aaKnown RBP7.28□□□□□ -1.24
SF3B1-212ENST00000496458 FBXO41Q8TF61 875 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 SNX19Q92543 992 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 SLC35A4Q96G79 324 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 GPR35Q9HC97 309 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 INTS13Q9NVM9 706 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 MRPS18AQ9NVS2 196 aaKnown RBP7.28□□□□□ -1.24
SF3B1-212ENST00000496458 ZNHIT2Q9UHR6 403 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 AGAP1Q9UPQ3 857 aa7.28□□□□□ -1.24
SF3B1-212ENST00000496458 THRAP3Q9Y2W1 955 aaKnown RBP7.28□□□□□ -1.24
SF3B1-212ENST00000496458 SALL3Q9BXA9 1300 aa7.27□□□□□ -1.24
SF3B1-212ENST00000496458 CHEK2O96017 543 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 LPOP22079 712 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-212ENST00000496458 GATA3P23771 443 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 CXCR5P32302 372 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 PLS1Q14651 629 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 CAMKK1Q8N5S9 505 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 BRIX1Q8TDN6 353 aaKnown RBP7.27□□□□□ -1.25
SF3B1-212ENST00000496458 DIS3LQ8TF46 1054 aaKnown RBP7.27□□□□□ -1.25
SF3B1-212ENST00000496458 C1GALT1C1Q96EU7 318 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 CDK5RAP3Q96JB5 506 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 CGRRF1Q99675 332 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 CNPPD1Q9BV87 410 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 TINAGL1Q9GZM7 467 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-212ENST00000496458 NMRK2Q9NPI5 230 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-212ENST00000496458 STXBP5LQ9Y2K9 1186 aa7.27□□□□□ -1.25
SF3B1-212ENST00000496458 VPS4BO75351 444 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 KIF20AO95235 890 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 NUDT3O95989 172 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 GNAI2P04899 355 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 HSPA6P17066 643 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 NKX6-1P78426 367 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-212ENST00000496458 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
SF3B1-212ENST00000496458 HABP2Q14520 560 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-212ENST00000496458 SLC30A5Q8TAD4 765 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 SYNPO2LQ9H987 977 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 ARMT1Q9H993 441 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 ETAA1Q9NY74 926 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 LRIT1Q9P2V4 623 aa7.26□□□□□ -1.25
SF3B1-212ENST00000496458 E7ENX8 843 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 M0QYG6 137 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 KIAA0355O15063 1070 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 PEX1O43933 1283 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 S100BP04271 92 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-212ENST00000496458 CHRM3P20309 590 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 TAP2Q03519 686 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 EXOSC9Q06265 439 aaKnown RBP7.25□□□□□ -1.25
SF3B1-212ENST00000496458 ERCC6LQ2NKX8 1250 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 MICALCLQ6ZW33 695 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms