RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CEP135Q66GS9 1140 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 SLC9A9Q8IVB4 645 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 ELMOD1Q8N336 334 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 C1orf127Q8N9H9 656 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 TDRD5Q8NAT2 981 aaKnown RBP17.64■□□□□ 0.41
SF3A1-209ENST00000496189 SLC7A14Q8TBB6 771 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 TSG101Q99816 390 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 RHOBTB2Q9BYZ6 727 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 PRKD2Q9BZL6 878 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 KCTD10Q9H3F6 313 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 POLIQ9UNA4 740 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 MAPK8IP1Q9UQF2 711 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 TRAF3IP3Q9Y228 551 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 ADAM12O43184 909 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 PHACTR2O75167 634 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 RFPL2O75678 378 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 ALADP13716 330 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 ATF2P15336 505 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 PTMSP20962 102 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 TRPC3Q13507 836 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 LMBRD2Q68DH5 695 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-209ENST00000496189 OTOP3Q7RTS5 596 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 ERCC4Q92889 916 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-209ENST00000496189 CYP4F11Q9HBI6 524 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
SF3A1-209ENST00000496189 WDR27A2RRH5 827 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 LOC730098B7Z3J9 87 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 SPTLC1O15269 473 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 ABLIM3O94929 683 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 CYP11A1P05108 521 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 KRT13P13646 458 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 SP100P23497 879 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-209ENST00000496189 NR2F2P24468 414 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 WNT7BP56706 349 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 COBLL1Q53SF7 1204 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 RSPO2Q6UXX9 243 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-209ENST00000496189 TMEM86AQ8N2M4 240 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 TRIML1Q8N9V2 468 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 TMEM174Q8WUU8 243 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 MFSD14AQ96MC6 490 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 AFF4Q9UHB7 1163 aaKnown RBP17.62■□□□□ 0.41
SF3A1-209ENST00000496189 MAN1B1Q9UKM7 699 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 USTQ9Y2C2 406 aa17.62■□□□□ 0.41
SF3A1-209ENST00000496189 MTCL1Q9Y4B5 1905 aaKnown RBP17.62■□□□□ 0.41
SF3A1-209ENST00000496189 TBC1D4O60343 1298 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 TSPY1Q01534 308 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 ADCY1Q08828 1119 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 SMARCB1Q12824 385 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 BIRC3Q13489 604 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 NFIL3Q16649 462 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 TRAPPC11Q7Z392 1133 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 TCEAL8Q8IYN2 117 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 DCP1BQ8IZD4 617 aaKnown RBP17.61■□□□□ 0.41
SF3A1-209ENST00000496189 OR5B17Q8NGF7 314 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 HPDLQ96IR7 371 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 WDR6Q9NNW5 1121 aaKnown RBP17.61■□□□□ 0.41
SF3A1-209ENST00000496189 DMAC2Q9NW81 257 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 SNX9Q9Y5X1 595 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 CLUHO75153 1309 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 VCANP13611 3396 aa17.61■□□□□ 0.41
SF3A1-209ENST00000496189 PSMA7O14818 248 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 MAPK13O15264 365 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 CCL16O15467 120 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 POU2F2P09086 479 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 GBP2P32456 591 aaPredicted RBP17.6■□□□□ 0.41
SF3A1-209ENST00000496189 PRCPP42785 496 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 MYL7Q01449 175 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 PLD1Q13393 1074 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 ADAM9Q13443 819 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
SF3A1-209ENST00000496189 SMYD4Q8IYR2 804 aaPredicted RBP17.6■□□□□ 0.41
SF3A1-209ENST00000496189 TOP6BLQ8N6T0 577 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 SPATA18Q8TC71 538 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.41
SF3A1-209ENST00000496189 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
SF3A1-209ENST00000496189 BIN1O00499 593 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 CETN3O15182 167 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 DCXO43602 365 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 PSMC2P35998 433 aaKnown RBP17.59■□□□□ 0.41
SF3A1-209ENST00000496189 LHX1P48742 406 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 TNNC1P63316 161 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 GPR17Q13304 367 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 MORC3Q14149 939 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 WSCD1Q658N2 575 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 ISM2Q6H9L7 571 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 IQCEQ6IPM2 695 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 DPH6Q7L8W6 267 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 RNF135Q8IUD6 432 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 FAM186BQ8IYM0 893 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 TMC2Q8TDI7 906 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 PARD3BQ8TEW8 1205 aa17.59■□□□□ 0.41
SF3A1-209ENST00000496189 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms