RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 PCDHA7Q9UN72 937 aa7.81□□□□□ -1.16
VPS52-221ENST00000495755 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
VPS52-221ENST00000495755 DMDP11532 3685 aa7.81□□□□□ -1.16
VPS52-221ENST00000495755 H0Y858 1186 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 CYB561D2O14569 222 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 ZNF197O14709 1029 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 EXTL3O43909 919 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 MOSPD3O75425 235 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 ECI2O75521 394 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 PRPF6O94906 941 aaKnown RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 LDHAP00338 332 aaKnown RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 HSP90AA1P07900 732 aaKnown RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 CEBPBP17676 345 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 HOXD13P35453 343 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 TAF6P49848 677 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 MRE11P49959 708 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 AMPD3Q01432 767 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 EHHADHQ08426 723 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 DUSP4Q13115 394 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 FOXD4L6Q3SYB3 417 aaPredicted RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 CYP4A22Q5TCH4 519 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 RESP18Q5W5W9 173 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 SCARA3Q6AZY7 606 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 IQCEQ6IPM2 695 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 FOXD4L3Q6VB84 417 aaPredicted RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 EPM2AIP1Q7L775 607 aaPredicted RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 NT5DC4Q86YG4 428 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 SYCP3Q8IZU3 236 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 OR10T2Q8NGX3 314 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 ING5Q8WYH8 240 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 HPS3Q969F9 1004 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 DHX58Q96C10 678 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 SAAL1Q96ER3 474 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 ZNF512Q96ME7 567 aaPredicted RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 PGLYRP2Q96PD5 576 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 TMEM209Q96SK2 561 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 C7orf25Q9BPX7 421 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 RTP3Q9BQQ7 232 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 CBWD1Q9BRT8 395 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 LRRC3Q9BY71 257 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 PLA2G2FQ9BZM2 168 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 ZCWPW1Q9H0M4 648 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 IRF2BPLQ9H1B7 796 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 MAGEF1Q9HAY2 307 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 RBAKQ9NYW8 714 aaPredicted RBP7.8□□□□□ -1.16
VPS52-221ENST00000495755 HSFX1Q9UBD0 423 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 DSEQ9UL01 958 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 CA14Q9ULX7 337 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 YIPF1Q9Y548 306 aa7.8□□□□□ -1.16
VPS52-221ENST00000495755 ANK1P16157 1881 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 MTMR11A4FU01 709 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 GOLGA8IPA6NC78 632 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 GOLGA8JA6NMD2 632 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 KPNA7A9QM74 516 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 KIAA0391O15091 583 aaKnown RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 POLR2DO15514 142 aaKnown RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 FCARP24071 287 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ME1P48163 572 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 EPHB3P54753 998 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 STARD6P59095 220 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ASIC1P78348 528 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 DNM1Q05193 864 aaKnown RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 PLD1Q13393 1074 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 FAM78AQ5JUQ0 283 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 WSCD1Q658N2 575 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 TANGO2Q6ICL3 276 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ARMCX5Q6P1M9 558 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 STXBP4Q6ZWJ1 553 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 PDZD4Q76G19 769 aaPredicted RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 LRRTM3Q86VH5 581 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 TMC8Q8IU68 726 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 CCDC105Q8IYK2 499 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ELMOD1Q8N336 334 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 C1orf127Q8N9H9 656 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 DTWD2Q8NBA8 298 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ATAD1Q8NBU5 361 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 LEMD2Q8NC56 503 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 SPRYD3Q8NCJ5 442 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ZNF507Q8TCN5 953 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ATOH1Q92858 354 aaPredicted RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 ELSPBP1Q96BH3 223 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ZSWIM3Q96MP5 696 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 KXD1Q9BQD3 176 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 PYM1Q9BRP8 204 aaKnown RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 DDX23Q9BUQ8 820 aaKnown RBP7.79□□□□□ -1.16
VPS52-221ENST00000495755 DNAJC25Q9H1X3 360 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 PCIF1Q9H4Z3 704 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 TBC1D17Q9HA65 648 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ARHGEF3Q9NR81 526 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 DLGAP2Q9P1A6 1054 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 CFAP45Q9UL16 551 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ZDHHC9Q9Y397 364 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ASB3Q9Y575 518 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 MYH15Q9Y2K3 1946 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 ZNF292O60281 2723 aa7.79□□□□□ -1.16
VPS52-221ENST00000495755 PVALEFA0A1B0GWK0 134 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms