RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CCDC112Q8NEF3 446 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 HASPINQ8TF76 798 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 NHEJ1Q9H9Q4 299 aaPredicted RBP16.79■□□□□ 0.28
PHF1-211ENST00000495509 CXXC1Q9P0U4 656 aaPredicted RBP16.79■□□□□ 0.28
PHF1-211ENST00000495509 I3L4J1 428 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 HOXA2O43364 376 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 BAIAP3O94812 1187 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 PNPLA4P41247 253 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 OR1G1P47890 313 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 CDK17Q00537 523 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 ORC1Q13415 861 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 SV2CQ496J9 727 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
PHF1-211ENST00000495509 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
PHF1-211ENST00000495509 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 DDX27Q96GQ7 796 aaKnown RBP16.78■□□□□ 0.28
PHF1-211ENST00000495509 ZNF560Q96MR9 790 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 FAM193BQ96PV7 902 aaPredicted RBP16.78■□□□□ 0.28
PHF1-211ENST00000495509 MRPL45Q9BRJ2 306 aaKnown RBP16.78■□□□□ 0.28
PHF1-211ENST00000495509 GDAP2Q9NXN4 497 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 HMGXB4Q9UGU5 601 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 CNTN6Q9UQ52 1028 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 COL4A6Q14031 1691 aa16.78■□□□□ 0.28
PHF1-211ENST00000495509 EFCAB14O75071 495 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 KIF4AO95239 1232 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 P4HA1P13674 534 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 PRKCIP41743 596 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 BRCC3P46736 316 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 TIGD5Q53EQ6 642 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 ZSCAN30Q86W11 494 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 RBBP8NLQ8NC74 664 aaPredicted RBP16.77■□□□□ 0.28
PHF1-211ENST00000495509 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 FAXDC2Q96IV6 333 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 SENP8Q96LD8 212 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 TWNKQ96RR1 684 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 CYP3A43Q9HB55 503 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
PHF1-211ENST00000495509 NME7Q9Y5B8 376 aa16.77■□□□□ 0.28
PHF1-211ENST00000495509 CYB561D2O14569 222 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 HCRTO43612 131 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 PBX3P40426 434 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 DCLRE1AQ6PJP8 1040 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 LIMS2Q7Z4I7 341 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.27
PHF1-211ENST00000495509 OLIG1Q8TAK6 271 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 ZNF689Q96CS4 500 aaPredicted RBP16.77■□□□□ 0.27
PHF1-211ENST00000495509 UROC1Q96N76 676 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 L1RE1Q9UN81 338 aa16.77■□□□□ 0.27
PHF1-211ENST00000495509 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.27
PHF1-211ENST00000495509 TIMM13Q9Y5L4 95 aaPredicted RBP16.77■□□□□ 0.27
PHF1-211ENST00000495509 NT5C1B-RDH14C9J2C7 533 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 NRP1O14786 923 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 KCNJ6P48051 423 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 ZNF132P52740 706 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 ASTE1Q2TB18 679 aaPredicted RBP16.76■□□□□ 0.27
PHF1-211ENST00000495509 KBTBD7Q8WVZ9 684 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 CCDC42Q96M95 316 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
PHF1-211ENST00000495509 DESI2Q9BSY9 194 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 SPTLC3Q9NUV7 552 aa16.76■□□□□ 0.27
PHF1-211ENST00000495509 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.76■□□□□ 0.27
PHF1-211ENST00000495509 EPN1Q9Y6I3 576 aaPredicted RBP16.76■□□□□ 0.27
PHF1-211ENST00000495509 FAM170AA1A519 330 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 CILPO75339 1184 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 CYP11B1P15538 503 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 CHRNB2P17787 502 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 SLC11A1P49279 550 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 AARSP49588 968 aaKnown RBP eCLIP16.75■□□□□ 0.271e-5■■□□□ 14
PHF1-211ENST00000495509 NDST1P52848 882 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 RAD23BP54727 409 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
PHF1-211ENST00000495509 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 WSCD1Q658N2 575 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 DSTYKQ6XUX3 929 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 SYT11Q9BT88 431 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 ELOVL4Q9GZR5 314 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 ADAMTS1Q9UHI8 967 aa16.75■□□□□ 0.27
PHF1-211ENST00000495509 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
PHF1-211ENST00000495509 BARX2Q9UMQ3 279 aaPredicted RBP16.75■□□□□ 0.27
PHF1-211ENST00000495509 ZNF263O14978 683 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 NRDCO43847 1150 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 HUS1O60921 280 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 ALDH2P05091 517 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 GALTP07902 379 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 LMO2P25791 158 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
PHF1-211ENST00000495509 GFPT1Q06210 699 aaPredicted RBP16.74■□□□□ 0.27
PHF1-211ENST00000495509 INCA1Q0VD86 236 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
PHF1-211ENST00000495509 C17orf53Q8N3J3 647 aaPredicted RBP16.74■□□□□ 0.27
PHF1-211ENST00000495509 SLC4A11Q8NBS3 891 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 DDX1Q92499 740 aaKnown RBP16.74■□□□□ 0.27
PHF1-211ENST00000495509 LPIN3Q9BQK8 851 aa16.74■□□□□ 0.27
PHF1-211ENST00000495509 ZSWIM1Q9BR11 485 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms