RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PAK2Q13177 524 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 RPS6KA1Q15418 735 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 LRIT3Q3SXY7 679 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 CFAP221Q4G0U5 840 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 SEZ6Q53EL9 994 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 TMEM240Q5SV17 173 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 MEI1Q5TIA1 1274 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 EEF1DP3Q658K8 133 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 ACAD10Q6JQN1 1059 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 GPR153Q6NV75 609 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 DAAM2Q86T65 1068 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 MSANTD4Q8NCY6 345 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 BEST2Q8NFU1 509 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 OR5B17Q8NGF7 314 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 LNX1Q8TBB1 728 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-214ENST00000495485 WNT8BQ93098 351 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 SCLYQ96I15 445 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 CPB2Q96IY4 423 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 VCPIP1Q96JH7 1222 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 PPP1R16BQ96T49 567 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 SLC9A7Q96T83 725 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 SYT11Q9BT88 431 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 PI4K2AQ9BTU6 479 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 PLVAPQ9BX97 442 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 MTMR12Q9C0I1 747 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 CYP3A43Q9HB55 503 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 CTTNBP2NLQ9P2B4 639 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 UVRAGQ9P2Y5 699 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 NOCTQ9UK39 431 aaKnown RBP10.95□□□□□ -0.66
HDAC3-214ENST00000495485 CNTN6Q9UQ52 1028 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 GINS2Q9Y248 185 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 CITO14578 2027 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 TRANK1O15050 2925 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 ANK1P16157 1881 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 UMODL1Q5DID0 1318 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 GRID2IPA4D2P6 1211 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 CARNS1A5YM72 827 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TMCO5BA8MYB1 307 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 MIF4GDA9UHW6 222 aaKnown RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 ENC1O14682 589 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 NBNO60934 754 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TADA3O75528 432 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 NPTXRO95502 500 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 STAU1O95793 577 aaKnown RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 CTSHP09668 335 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 PNMA6AP0CW24 399 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 CXCL8P10145 99 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 GNA15P30679 374 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 NSFP46459 744 aaKnown RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 MYL6P60660 151 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 LPIN1Q14693 890 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 ZBTB41Q5SVQ8 909 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TEX35Q5T0J7 233 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TMEM270Q6UE05 265 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 PEX26Q7Z412 305 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 NOP9Q86U38 636 aaKnown RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 RBBP8NLQ8NC74 664 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 SLC35G2Q8TBE7 412 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 RNPC3Q96LT9 517 aaKnown RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 OSBPL9Q96SU4 736 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 NAP1L3Q99457 506 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 OSMRQ99650 979 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.666e-10■■■■■ 27
HDAC3-214ENST00000495485 TRAIPQ9BWF2 469 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 ZNF518BQ9C0D4 1074 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 VRTNQ9H8Y1 702 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
HDAC3-214ENST00000495485 GTF3C4Q9UKN8 822 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TFR2Q9UP52 801 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 SLC4A7Q9Y6M7 1214 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 CAPN6Q9Y6Q1 641 aa10.94□□□□□ -0.66
HDAC3-214ENST00000495485 TMEM265A0A087WTH1 108 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 THAP12O43422 761 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 ERLIN1O75477 346 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 CST3P01034 146 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 AMHP03971 560 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 MMEP08473 750 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 PAEPP09466 180 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 ZSCAN20P17040 1043 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 ABCB4P21439 1286 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 RAB27AP51159 221 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 TNNC1P63316 161 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 SMAD3P84022 425 aaKnown RBP10.93□□□□□ -0.66
HDAC3-214ENST00000495485 FMO1Q01740 532 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 MBTPS1Q14703 1052 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 CLEC16AQ2KHT3 1053 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 TAF3Q5VWG9 929 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 JADE1Q6IE81 842 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 ZNF365Q70YC5 407 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 DEFB128Q7Z7B8 93 aa10.93□□□□□ -0.66
HDAC3-214ENST00000495485 UBL4BQ8N7F7 174 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms