RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 NT5DC3Q86UY8 548 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 C1orf127Q8N9H9 656 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 HINFPQ9BQA5 517 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 MTG1Q9BT17 334 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 CTTNBP2NLQ9P2B4 639 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 COG5Q9UP83 839 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 STXBP5LQ9Y2K9 1186 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 CYP1A2P05177 515 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 FGFR4P22455 802 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 YWHAEP62258 255 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 GNASQ5JWF2 1037 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 PPP1R2P3Q6NXS1 205 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 MMS22LQ6ZRQ5 1243 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 PPP1R13LQ8WUF5 828 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 CAPNS2Q96L46 248 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 RUFY1Q96T51 708 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 MYCBPQ99417 103 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 GOLPH3Q9H4A6 298 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 CDHR5Q9HBB8 845 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 SIX4Q9UIU6 781 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 PACSIN2Q9UNF0 486 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 MYADML2A6NDP7 307 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 HSF2BPO75031 334 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 CYP1A1P04798 512 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 ATICP31939 592 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 ASPAP45381 313 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 NNTQ13423 1086 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 TMEM132DQ14C87 1099 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 C11orf63Q6NUN7 778 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 TAF2Q6P1X5 1199 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 TSEN2Q8NCE0 465 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 PBKQ96KB5 322 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 NCAPGQ9BPX3 1015 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 PLEKHA5Q9HAU0 1116 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 CASP8AP2Q9UKL3 1982 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 AMFRQ9UKV5 643 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 AOC2O75106 756 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 RARBP10826 455 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 SLC7A5Q01650 507 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 SP3Q02447 781 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 SNX17Q15036 470 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 DEFB115Q30KQ5 88 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 TRIM11Q96F44 468 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 HES6Q96HZ4 224 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 VRTNQ9H8Y1 702 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 CISHQ9NSE2 258 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 UVRAGQ9P2Y5 699 aa19.73■□□□□ 0.75
TSPAN4-212ENST00000494815 KRT19P08727 400 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 MYBL1P10243 752 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 CRYBB1P53674 252 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 ZNF200P98182 395 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 CENPCQ03188 943 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 TTMPQ5BVD1 217 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 ZNF667Q5HYK9 610 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 CXorf38Q8TB03 319 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 ZNF653Q96CK0 615 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 CFHR5Q9BXR6 569 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 ITGA11Q9UKX5 1188 aa19.72■□□□□ 0.75
TSPAN4-212ENST00000494815 KCNK3O14649 394 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 NPTXRO95502 500 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 GLE1Q53GS7 698 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 DERAQ9Y315 318 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 ATXN2Q99700 1313 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 CALCAP01258 141 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 ITGB3P05106 788 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 LIG3P49916 1009 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 DNA2P51530 1060 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 CACNB2Q08289 660 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 C8orf74Q6P047 294 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 ARL8AQ96BM9 186 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 BCO2Q9BYV7 579 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 AVENQ9NQS1 362 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 SCN10AQ9Y5Y9 1956 aa19.71■□□□□ 0.75
TSPAN4-212ENST00000494815 THAP12O43422 761 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 NSFP46459 744 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 MCOLN2Q8IZK6 566 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 BCCIPQ9P287 314 aaKnown RBP eCLIP19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 GTF2IRD1Q9UHL9 959 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 STAU1O95793 577 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 PGK1P00558 417 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 CD58P19256 250 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 MRPS25P82663 173 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 ZNF564Q8TBZ8 553 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 TMEM40Q8WWA1 233 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 ZNF606Q8WXB4 792 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 VCPIP1Q96JH7 1222 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 NUP85Q9BW27 656 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 FAM124BQ9H5Z6 455 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 CREBZFQ9NS37 354 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 SMARCAL1Q9NZC9 954 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 EHD2Q9NZN4 543 aa19.7■□□□□ 0.74
TSPAN4-212ENST00000494815 CITO14578 2027 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 ADAMTS4O75173 837 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 WEE2P0C1S8 567 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 P4HA1P13674 534 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 YARSP54577 528 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 NOMO3P69849 1222 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 WDR72Q3MJ13 1102 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 NAA35Q5VZE5 725 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 CXCL17Q6UXB2 119 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms