RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 AGO3Q9H9G7 860 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 WBP1LQ9NX94 342 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 DPP3Q9NY33 737 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 UVRAGQ9P2Y5 699 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 TMEM59LQ9UK28 342 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 KIAA1257Q9ULG3 409 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 TTC7AQ9ULT0 858 aaPredicted RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 UBQLN1Q9UMX0 589 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 ST3GAL5Q9UNP4 418 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 COG5Q9UP83 839 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 IPPQ9Y573 584 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 RALGAPA2Q2PPJ7 1873 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 UQCRHLA0A096LP55 91 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 A0A0U1RQF3 1178 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PTGESO14684 152 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 RPS6KA5O75582 802 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 RECQL4O94761 1208 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 CD4P01730 458 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 ITGB3P05106 788 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 UQCRHP07919 91 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 CFHP08603 1231 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 MMP8P22894 467 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 GNA15P30679 374 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 RPL34P49207 117 aaKnown RBP7.25□□□□□ -1.25
MSH5-217ENST00000494458 RAD23BP54727 409 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 NOMO3P69849 1222 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 LPIN1Q14693 890 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PTGISQ16647 500 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 WDR72Q3MJ13 1102 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 ZNF667Q5HYK9 610 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 C1orf53Q5VUE5 145 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 C9orf57Q5W0N0 161 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PLEKHA7Q6IQ23 1121 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 C11orf63Q6NUN7 778 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 TMEM270Q6UE05 265 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 TMEM92Q6UXU6 159 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 DPH6Q7L8W6 267 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 GPIHBP1Q8IV16 184 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 SYCE1Q8N0S2 351 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 CRYBG2Q8N1P7 616 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 RASGEF1CQ8N431 466 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 CEP112Q8N8E3 955 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 SLC4A11Q8NBS3 891 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 TFAP2BQ92481 460 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 CD101Q93033 1021 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 CYFIP2Q96F07 1278 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 HPDLQ96IR7 371 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 OSBPL9Q96SU4 736 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 NXF3Q9H4D5 531 aaKnown RBP7.25□□□□□ -1.25
MSH5-217ENST00000494458 OGDHLQ9ULD0 1010 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PADI3Q9ULW8 664 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 BARX2Q9UMQ3 279 aaPredicted RBP7.25□□□□□ -1.25
MSH5-217ENST00000494458 AGAP1Q9UPQ3 857 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PIN4Q9Y237 131 aaKnown RBP7.25□□□□□ -1.25
MSH5-217ENST00000494458 PTPN22Q9Y2R2 807 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 GIT1Q9Y2X7 761 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 HYOU1Q9Y4L1 999 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PCDHB4Q9Y5E5 795 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
MSH5-217ENST00000494458 A0A1W2PQ45 241 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 A0A1W2PQY0 241 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 BHMG1C9JSJ3 638 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 M0QZ92 97 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 ARVCFO00192 962 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 PDE2AO00408 941 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 DNM1LO00429 736 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 ENC1O14682 589 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 GABRDO14764 452 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 DDX3YO15523 660 aaKnown RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 XPOTO43592 962 aaKnown RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 BUB1O43683 1085 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 MGEA5O60502 916 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 BUB1BO60566 1050 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 KIF4AO95239 1232 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 WEE2P0C1S8 567 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 CKBP12277 381 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 KRT5P13647 590 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 P4HA1P13674 534 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 ATF7P17544 494 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 PAX3P23760 479 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 POLR2BP30876 1174 aaKnown RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 PNPLA4P41247 253 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 GABRB2P47870 512 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 AARSP49588 968 aaKnown RBP eCLIP7.24□□□□□ -1.25
MSH5-217ENST00000494458 PEX5P50542 639 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 RAB27AP51159 221 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 YARSP54577 528 aaKnown RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 HTRA3P83110 453 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 SOX4Q06945 474 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 MBTPS1Q14703 1052 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 GPNMBQ14956 572 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 CNGA2Q16280 664 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 TMEM132AQ24JP5 1023 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 PKDCCQ504Y2 493 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 PPP1R15BQ5SWA1 713 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 ZNF618Q5T7W0 954 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 AGMOQ6ZNB7 445 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 UNC93AQ86WB7 457 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 DNAAF5Q86Y56 855 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms