RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 C21orf62-AS1Q17RA5 79 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 CT83Q5H943 113 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 CEP78Q5JTW2 689 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 Q6ZVL8 140 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 SEM1Q6ZVN7 128 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 PCGF5Q86SE9 256 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 Q8NA96 180 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 STAG1Q8WVM7 1258 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 RIN2Q8WYP3 895 aaPredicted RBP2.78□□□□□ -1.96
PTPN12-212ENST00000494248 HOXB13Q92826 284 aaPredicted RBP2.78□□□□□ -1.96
PTPN12-212ENST00000494248 NINJ1Q92982 152 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 FATE1Q969F0 183 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 VPS33BQ9H267 617 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 NRIP3Q9NQ35 241 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 HSFX1Q9UBD0 423 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 SCOCQ9UIL1 159 aa2.78□□□□□ -1.96
PTPN12-212ENST00000494248 FBXO9Q9UK97 447 aaPredicted RBP2.78□□□□□ -1.96
PTPN12-212ENST00000494248 MRPL42Q9Y6G3 142 aaKnown RBP2.78□□□□□ -1.96
PTPN12-212ENST00000494248 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.77□□□□□ -1.97
PTPN12-212ENST00000494248 A0A1W2PS29 197 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 CCDC189A1A4V9 331 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 GSG1L2A8MUP6 293 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 TEX33O43247 280 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 LPLP06858 475 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 VIL1P09327 827 aaKnown RBP2.77□□□□□ -1.97
PTPN12-212ENST00000494248 RAP2AP10114 183 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 ECHS1P30084 290 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 ALDH1A3P47895 512 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 CDK17Q00537 523 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 FSCN1Q16658 493 aaKnown RBP2.77□□□□□ -1.97
PTPN12-212ENST00000494248 ATP13A4Q4VNC1 1196 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 SLC44A4Q53GD3 710 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 ZNF280DQ6N043 979 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 SLC18B1Q6NT16 456 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 C16orf86Q6ZW13 317 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 RASAL3Q86YV0 1011 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 PRPF38AQ8NAV1 312 aaKnown RBP2.77□□□□□ -1.97
PTPN12-212ENST00000494248 NUP133Q8WUM0 1156 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 STON2Q8WXE9 905 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 JDP2Q8WYK2 163 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 SLC5A5Q92911 643 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 EAF2Q96CJ1 260 aaPredicted RBP2.77□□□□□ -1.97
PTPN12-212ENST00000494248 MARK4Q96L34 752 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 CAMKK2Q96RR4 588 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 PNKPQ96T60 521 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 NAP1L4Q99733 375 aaKnown RBP2.77□□□□□ -1.97
PTPN12-212ENST00000494248 FBXO34Q9NWN3 711 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 SLC23A1Q9UHI7 598 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 TCEAL9Q9UHQ7 104 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 CD2APQ9Y5K6 639 aa2.77□□□□□ -1.97
PTPN12-212ENST00000494248 GCOM1H8Y6P7 765 aaPredicted RBP2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ALAS1P13196 640 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 MTHFD2P13995 350 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 MAN1A1P33908 653 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ADCYAP1R1P41586 468 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 EVA1CP58658 441 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 AMPD3Q01432 767 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 SLFN5Q08AF3 891 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 LAMB3Q13751 1172 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 PTPRRQ15256 657 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 RABEP1Q15276 862 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 SEPT7Q16181 437 aaKnown RBP2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ZNF628Q5EBL2 1059 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 MUM1L1Q5H9M0 696 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ODR4Q5SWX8 454 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ZNF529Q6P280 563 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 RINLQ6ZS11 566 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 KRT73Q86Y46 540 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 NIM1KQ8IY84 436 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 PQLC1Q8N2U9 271 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 SDR16C5Q8N3Y7 309 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 FITM2Q8N6M3 262 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 FBXO18Q8NFZ0 1043 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 APPBP2Q92624 585 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 HMCESQ96FZ2 354 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ACAP3Q96P50 834 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 SENP6Q9GZR1 1112 aaPredicted RBP2.76□□□□□ -1.97
PTPN12-212ENST00000494248 VPS16Q9H269 839 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 SLKQ9H2G2 1235 aaPredicted RBP2.76□□□□□ -1.97
PTPN12-212ENST00000494248 EMC7Q9NPA0 242 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 LANCL2Q9NS86 450 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 TMEM140Q9NV12 185 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 DPP7Q9UHL4 492 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 ZNF112Q9UJU3 913 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 SCINQ9Y6U3 715 aa2.76□□□□□ -1.97
PTPN12-212ENST00000494248 TCF20Q9UGU0 1960 aaKnown RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 WDR27A2RRH5 827 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 CFAP69A5D8W1 941 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 VWC2LB2RUY7 222 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 KIF3BO15066 747 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 PLIN1O60240 522 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 ZNF500O60304 480 aaPredicted RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 CD1AP06126 327 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 GSPT1P15170 499 aaKnown RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 CD53P19397 219 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 COPB2P35606 906 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 NANOS2P60321 138 aaKnown RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 POU5F1BQ06416 359 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 HDAC1Q13547 482 aaPredicted RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 DHX8Q14562 1220 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms