RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 SCUBE1Q8IWY4 988 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 UBL4BQ8N7F7 174 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 DTX3LQ8TDB6 740 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 HPS3Q969F9 1004 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 NSL1Q96IY1 281 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 TYW1Q9NV66 732 aaKnown RBP7.47□□□□□ -1.21
EPHA3-203ENST00000494014 TUBA8Q9NY65 449 aaPredicted RBP7.47□□□□□ -1.21
EPHA3-203ENST00000494014 SENP1Q9P0U3 644 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 SMG5Q9UPR3 1016 aaKnown RBP7.47□□□□□ -1.21
EPHA3-203ENST00000494014 ALPK3Q96L96 1907 aa7.47□□□□□ -1.21
EPHA3-203ENST00000494014 A0A1W2PRG0 241 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 A6NJR5 290 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 M0R2N6 131 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 NDC80O14777 642 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 AP1G1O43747 822 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 MAGEC1O60732 1142 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 SUPT3HO75486 399 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 ACSL3O95573 720 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 ANPEPP15144 967 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 WDR4P57081 412 aaKnown RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 PDE1BQ01064 536 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 PLOD1Q02809 727 aaPredicted RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 DNAJC3Q13217 504 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 MED21Q13503 144 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 CERKLQ49MI3 558 aaPredicted RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 UBAP2Q5T6F2 1119 aaKnown RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 SEL1L2Q5TEA6 688 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 SYDE2Q5VT97 1194 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 DNAJC14Q6Y2X3 702 aaPredicted RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 CROCCP3Q8IVE0 287 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 SRRM1Q8IYB3 904 aaKnown RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 PRELID2Q8N945 189 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 DDX12PQ92771 950 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 C18orf8Q96DM3 657 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 WRNIP1Q96S55 665 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 WDR18Q9BV38 432 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 GPAMQ9HCL2 828 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 FAIMQ9NVQ4 179 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 HERC5Q9UII4 1024 aaKnown RBP7.46□□□□□ -1.21
EPHA3-203ENST00000494014 NAV1Q8NEY1 1877 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 PARP14Q460N5 1801 aa7.46□□□□□ -1.21
EPHA3-203ENST00000494014 MYMKA6NI61 221 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 UCHL3P15374 230 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 PORP16435 677 aaPredicted RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 PLCG2P16885 1265 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 ITIH2P19823 946 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 GALCP54803 685 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CDC16Q13042 620 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 THOC5Q13769 683 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 KRT72Q14CN4 511 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 TRMT5Q32P41 509 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 MAP3K21Q5TCX8 1036 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 GPR153Q6NV75 609 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CCDC62Q6P9F0 684 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 PPP4R3CPQ6ZMV5 832 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 NET1Q7Z628 596 aaPredicted RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 NUP93Q8N1F7 819 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 SPATA5Q8NB90 893 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 LARP4BQ92615 738 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 PTCD3Q96EY7 689 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 TTC25Q96NG3 672 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CYLDQ9NQC7 956 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 THEGQ9P2T0 379 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 PPP1R9AQ9ULJ8 1098 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 TMEM98Q9Y2Y6 226 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 GREB1LQ9C091 1923 aaPredicted RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 TCP10L2B9ZVM9 353 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 DNAJC6O75061 913 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 FKBP6O75344 327 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CIB2O75838 187 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 LDHCP07864 332 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 COPB2P35606 906 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 COILP38432 576 aaPredicted RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 TXKP42681 527 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 HADHBP55084 474 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 RHBDL3P58872 404 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 ARHGAP4P98171 946 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CAP1Q01518 475 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 SYDE1Q6ZW31 735 aaPredicted RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 ZC3H3Q8IXZ2 948 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CCDC105Q8IYK2 499 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 LCORLQ8N3X6 602 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 C12orf50Q8NA57 414 aaPredicted RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 SLC35G2Q8TBE7 412 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 U2AF1L4Q8WU68 220 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 SLCO2A1Q92959 643 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 NMD3Q96D46 503 aaKnown RBP7.46□□□□□ -1.22
EPHA3-203ENST00000494014 CDK5RAP3Q96JB5 506 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 BHMT2Q9H2M3 363 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 TRPV5Q9NQA5 729 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 EMILIN3Q9NT22 766 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 MORF4L1Q9UBU8 362 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 STK24Q9Y6E0 443 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 ZMYM2Q9UBW7 1377 aa7.46□□□□□ -1.22
EPHA3-203ENST00000494014 ARHGAP10A1A4S6 786 aa7.45□□□□□ -1.22
EPHA3-203ENST00000494014 RASA4BC9J798 803 aa7.45□□□□□ -1.22
EPHA3-203ENST00000494014 RASA4O43374 803 aa7.45□□□□□ -1.22
EPHA3-203ENST00000494014 TPD52L2O43399 206 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms