RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ELMSAN1Q6PJG2 1045 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 NPAS3Q8IXF0 933 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 C1orf127Q8N9H9 656 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 IQUBQ8NA54 791 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 APPL2Q8NEU8 664 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 KCNG4Q8TDN1 519 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 LEO1Q8WVC0 666 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 SCFD1Q8WVM8 642 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 ZSWIM3Q96MP5 696 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 LRRC3Q9BY71 257 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 IGSF9Q9P2J2 1179 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 AFF4Q9UHB7 1163 aaKnown RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 SLC27A5Q9Y2P5 690 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.22
HSPG2-212ENST00000493940 NUP210Q8TEM1 1887 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-212ENST00000493940 NCANO14594 1321 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 F5P12259 2224 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 ATG2BQ96BY7 2078 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 PRRG1O14668 218 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 CLIC2O15247 247 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 HCRTO43612 131 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 CYP11A1P05108 521 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 PTPN2P17706 415 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 TYMPP19971 482 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 ABCD1P33897 745 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 NUBP1P53384 320 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 GPC5P78333 572 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 ASIC1P78348 528 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 TWF1Q12792 350 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 DUSP4Q13115 394 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 POSTNQ15063 836 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 WSCD1Q658N2 575 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 TPGS2Q68CL5 300 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 OVOS1Q6IE37 1185 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 CBWD2Q8IUF1 395 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 SYCP3Q8IZU3 236 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 ATAD1Q8NBU5 361 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 GPR152Q8TDT2 470 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 CUEDC2Q9H467 287 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 WDR87Q6ZQQ6 2873 aa13.64□□□□□ -0.23
HSPG2-212ENST00000493940 FANCMQ8IYD8 2048 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 MTMR11A4FU01 709 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 CYB561D2O14569 222 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 XPOTO43592 962 aaKnown RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 EXTL3O43909 919 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 XYLBO75191 536 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 ITGB3P05106 788 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 CPB1P15086 417 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 ELF1P32519 619 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 GPR17Q13304 367 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 FAM26FQ5R3K3 315 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 ATL3Q6DD88 541 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 TANGO2Q6ICL3 276 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 CENPPQ6IPU0 288 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 UNC13DQ70J99 1090 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 SIX5Q8N196 739 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 NOC3LQ8WTT2 800 aaKnown RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 PAGE5Q96GU1 130 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 PYM1Q9BRP8 204 aaKnown RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 SLC39A2Q9NP94 309 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 TMLHEQ9NVH6 421 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 RBAKQ9NYW8 714 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 KCNH3Q9ULD8 1083 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 CA14Q9ULX7 337 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 MYH10P35580 1976 aa13.63□□□□□ -0.23
HSPG2-212ENST00000493940 ZFHX2Q9C0A1 2572 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-212ENST00000493940 IL18RAPO95256 599 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 LRG1P02750 347 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 PFKFB1P16118 471 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 FCARP24071 287 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 POLR2BP30876 1174 aaKnown RBP13.62□□□□□ -0.23
HSPG2-212ENST00000493940 TAF6P49848 677 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 TFAMQ00059 246 aaKnown RBP13.62□□□□□ -0.23
HSPG2-212ENST00000493940 ALCAMQ13740 583 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 ARMCX5Q6P1M9 558 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 RTL10Q7L3V2 364 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 OSTM1Q86WC4 334 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 GPIHBP1Q8IV16 184 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms