RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DBR1Q9UK59 544 aaKnown RBP21.05■□□□□ 0.96
RNF40-203ENST00000493683 VHLP40337 213 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 GTF2H3Q13889 308 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 ADRM1Q16186 407 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 ACCSLQ4AC99 568 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 C4orf33Q8N1A6 199 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 CPA5Q8WXQ8 436 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 ATXN7L3BQ96GX2 97 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 POLD4Q9HCU8 107 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 SEC24DO94855 1032 aaPredicted RBP21.05■□□□□ 0.96
RNF40-203ENST00000493683 KDM7AQ6ZMT4 941 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 BBS7Q8IWZ6 715 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 THTPAQ9BU02 230 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 CATSPERBQ9H7T0 1116 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 FHOD1Q9Y613 1164 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 GEMIN4P57678 1058 aaKnown RBP21.04■□□□□ 0.96
RNF40-203ENST00000493683 TJAP1Q5JTD0 557 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 SMARCAD1Q9H4L7 1026 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 RGL1Q9NZL6 768 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 PAIP2BQ9ULR5 123 aaKnown RBP21.04■□□□□ 0.96
RNF40-203ENST00000493683 VPS9D1Q9Y2B5 631 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 COMTP21964 271 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 CCDC85BQ15834 202 aaPredicted RBP21.04■□□□□ 0.96
RNF40-203ENST00000493683 C6orf10Q5SRN2 563 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 MYMKA6NI61 221 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 SPDYE5A6NIY4 337 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 ADCY3O60266 1144 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 ITIH4Q14624 930 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 SPDYE7PQ495Y7 208 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 C3orf62Q6ZUJ4 267 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 SLC30A1Q9Y6M5 507 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 VCPP55072 806 aaKnown RBP21.04■□□□□ 0.96
RNF40-203ENST00000493683 PKN3Q6P5Z2 889 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 CCNJLQ8IV13 435 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 HPS3Q969F9 1004 aa21.04■□□□□ 0.96
RNF40-203ENST00000493683 RPAP3Q9H6T3 665 aaPredicted RBP21.04■□□□□ 0.96
RNF40-203ENST00000493683 SYTL3Q4VX76 610 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 RDM1Q8NG50 284 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 SLC30A5Q8TAD4 765 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 SLC38A7Q9NVC3 462 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 CLASP2O75122 1294 aaKnown RBP21.03■□□□□ 0.96
RNF40-203ENST00000493683 GYPCP04921 128 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 GSNP06396 782 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 ITGA8P53708 1063 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 STK4Q13043 487 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 CENPPQ6IPU0 288 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 NAPEPLDQ6IQ20 393 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 LVRNQ6Q4G3 990 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 PSMD7P51665 324 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 KCNK10P57789 538 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 KLHDC7AQ5VTJ3 777 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 FBXW10Q5XX13 1052 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 BTNL9Q6UXG8 535 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 LINC00523Q86TU6 105 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 FAR2Q96K12 515 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 LSM7Q9UK45 103 aaKnown RBP21.03■□□□□ 0.96
RNF40-203ENST00000493683 ALG6Q9Y672 507 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 KDM6BO15054 1643 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 NPHP3-ACAD11A0A0J9YXS1 232 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 COILP38432 576 aaPredicted RBP21.03■□□□□ 0.96
RNF40-203ENST00000493683 EFHC1Q5JVL4 640 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 SHCBP1Q8NEM2 672 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 GOLPH3Q9H4A6 298 aa21.03■□□□□ 0.96
RNF40-203ENST00000493683 RBM46Q8TBY0 533 aaKnown RBP21.02■□□□□ 0.96
RNF40-203ENST00000493683 C20orf96Q9NUD7 363 aaPredicted RBP21.02■□□□□ 0.96
RNF40-203ENST00000493683 ZNF609O15014 1411 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 FAM196BA6NMK8 535 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 CYP2C8P10632 490 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 STIP1P31948 543 aaKnown RBP21.02■□□□□ 0.96
RNF40-203ENST00000493683 CORO7P57737 925 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 SKOR1P84550 965 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 STX5Q13190 355 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 DDI1Q8WTU0 396 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 NT5C1AQ9BXI3 368 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 TMEM161AQ9NX61 479 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 PNPLA6Q8IY17 1366 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 PRLRP16471 622 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 GPD1P21695 349 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 FDFT1P37268 417 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 VPS37AQ8NEZ2 397 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 GTF3C4Q9UKN8 822 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 CHMP2BQ9UQN3 213 aa21.02■□□□□ 0.96
RNF40-203ENST00000493683 PSTPIP1O43586 416 aa21.02■□□□□ 0.95
RNF40-203ENST00000493683 EXTL3O43909 919 aa21.02■□□□□ 0.95
RNF40-203ENST00000493683 ENTPD3O75355 529 aa21.02■□□□□ 0.95
RNF40-203ENST00000493683 GRIK1P39086 918 aa21.02■□□□□ 0.95
RNF40-203ENST00000493683 KPNB1Q14974 876 aaKnown RBP21.02■□□□□ 0.95
RNF40-203ENST00000493683 KATNAL1Q9BW62 490 aa21.02■□□□□ 0.95
RNF40-203ENST00000493683 TEX13BQ9BXU2 312 aa21.02■□□□□ 0.95
RNF40-203ENST00000493683 C19orf81C9J6K1 198 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 M0R3G1 203 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 MEI1Q5TIA1 1274 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 BARGINQ6ZT62 677 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 NYAP1Q6ZVC0 841 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SPATA18Q8TC71 538 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SEPT1Q8WYJ6 367 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 USP6NLQ92738 828 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 PRPF18Q99633 342 aaKnown RBP21.01■□□□□ 0.95
RNF40-203ENST00000493683 C10orf88Q9H8K7 445 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms