RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DPP3Q9NY33 737 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 ADAM22Q9P0K1 906 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 STIM2Q9P246 746 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 CHORDC1Q9UHD1 332 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-216ENST00000492977 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 L1RE1Q9UN81 338 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 TRIP12Q14669 1992 aaPredicted RBP14.96□□□□□ -0.02
PTPN7-216ENST00000492977 CCDC66A2RUB6 948 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 TMEM110-MUSTN1A8MSY1 372 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 MED7O43513 233 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 CFHP08603 1231 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 RRM1P23921 792 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 CTNNA2P26232 953 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 FLT3LGP49771 235 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 YARSP54577 528 aaKnown RBP14.95□□□□□ -0.02
PTPN7-216ENST00000492977 ZNF200P98182 395 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-216ENST00000492977 GNASQ5JWF2 1037 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 CYP4F22Q6NT55 531 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 TAF2Q6P1X5 1199 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 HDXQ7Z353 690 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 TTC39CQ8N584 583 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 TMEM35BQ8NCS4 154 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 HPDLQ96IR7 371 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 TSPAN18Q96SJ8 248 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 ZSWIM1Q9BR11 485 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 ARHGAP39Q9C0H5 1083 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 DMGDHQ9UI17 866 aaKnown RBP14.95□□□□□ -0.02
PTPN7-216ENST00000492977 GABRQQ9UN88 632 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 POLIQ9UNA4 740 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 SCINQ9Y6U3 715 aa14.95□□□□□ -0.02
PTPN7-216ENST00000492977 KRIT1O00522 736 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 SEPT4O43236 478 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 SPOPO43791 374 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 CALB1P05937 261 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 MMP8P22894 467 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 TNFRSF8P28908 595 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 POLR2BP30876 1174 aaKnown RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 CDH5P33151 784 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 SLC1A1P43005 524 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PEX5P50542 639 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PTP4A2Q12974 167 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PPP2R5EQ16537 467 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 DCAF12L1Q5VU92 463 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PLEKHA7Q6IQ23 1121 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 SCARA5Q6ZMJ2 495 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PASD1Q8IV76 773 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PPP1R13LQ8WUF5 828 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 HDAC7Q8WUI4 952 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 ALG3Q92685 438 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 SNX27Q96L92 541 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 RNPC3Q96LT9 517 aaKnown RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 KRT12Q99456 494 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 ANAPC7Q9UJX3 599 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 AGAP1Q9UPQ3 857 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 CEP83Q9Y592 693 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 PCDHA3Q9Y5H8 950 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 RALGAPA2Q2PPJ7 1873 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 MYADML2A6NDP7 307 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 MYO1FO00160 1098 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 MAP2K7O14733 419 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 FGGP02679 453 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 BRD2P25440 801 aaKnown RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 ALKAL1Q6UXT8 129 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 IFT20Q8IY31 132 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 KRT222Q8N1A0 295 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 BTBD6Q96KE9 485 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 C11orf70Q9BRQ4 267 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 EIF2AQ9BY44 585 aaKnown RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 TRIM6Q9C030 488 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-216ENST00000492977 LHX5Q9H2C1 402 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 SNTG2Q9NY99 539 aa14.94□□□□□ -0.02
PTPN7-216ENST00000492977 CILPO75339 1184 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 ZMYND10O75800 440 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 SASH3O75995 380 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 RARBP10826 455 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 HSPA6P17066 643 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 RAD23BP54727 409 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 SLC7A5Q01650 507 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 MYO1EQ12965 1108 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 MAMLD1Q13495 774 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 ZBTB6Q15916 424 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 MMS22LQ6ZRQ5 1243 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 TMEM40Q8WWA1 233 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 TFAP2BQ92481 460 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 KRT35Q92764 455 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 TMEM106CQ9BVX2 250 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 AP1M1Q9BXS5 423 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 SDCBP2Q9H190 292 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 SLITRK6Q9H5Y7 841 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 PARVAQ9NVD7 372 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 CNTN3Q9P232 1028 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 LCMT1Q9UIC8 334 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 SCN10AQ9Y5Y9 1956 aa14.93□□□□□ -0.02
PTPN7-216ENST00000492977 CASP8AP2Q9UKL3 1982 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 GOLGA6L10A0A0M3HER8 536 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 RPLP2P05387 115 aaKnown RBP14.92□□□□□ -0.02
PTPN7-216ENST00000492977 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-216ENST00000492977 RAP1GAPP47736 663 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms