RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 ANK1P16157 1881 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 EXTL3O43909 919 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 LDHAP00338 332 aaKnown RBP19.48■□□□□ 0.71
PTPRU-207ENST00000492954 CYP11A1P05108 521 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 CASP1P29466 404 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
PTPRU-207ENST00000492954 TAF6P49848 677 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 CLCN5P51795 746 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 TFAMQ00059 246 aaKnown RBP19.48■□□□□ 0.71
PTPRU-207ENST00000492954 PRSS36Q5K4E3 855 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 POTEHQ6S545 545 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 STXBP4Q6ZWJ1 553 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 MTSS1LQ765P7 747 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 HS6ST3Q8IZP7 471 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 ELMOD1Q8N336 334 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 OR10T2Q8NGX3 314 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 MCRS1Q96EZ8 462 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 FAM84AQ96KN4 292 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 C7orf25Q9BPX7 421 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 PYM1Q9BRP8 204 aaKnown RBP19.48■□□□□ 0.71
PTPRU-207ENST00000492954 CRISPLD1Q9H336 500 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 FAM13BQ9NYF5 915 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 RCOR1Q9UKL0 485 aa19.48■□□□□ 0.71
PTPRU-207ENST00000492954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.47■□□□□ 0.71
PTPRU-207ENST00000492954 NRG2O14511 850 aaPredicted RBP19.47■□□□□ 0.71
PTPRU-207ENST00000492954 CYB561D2O14569 222 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 HOXD13P35453 343 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 CCR2P41597 374 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 DUSP4Q13115 394 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 GPR17Q13304 367 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 MYBPC2Q14324 1141 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 FAM26FQ5R3K3 315 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 NT5DC4Q86YG4 428 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 ATAD1Q8NBU5 361 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 KXD1Q9BQD3 176 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 BLZF1Q9H2G9 400 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 MAGEF1Q9HAY2 307 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 SLC2A4RGQ9NR83 387 aa19.47■□□□□ 0.71
PTPRU-207ENST00000492954 MTMR11A4FU01 709 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 GALR2O43603 387 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-207ENST00000492954 PI15O43692 258 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 POLR2BP30876 1174 aaKnown RBP19.46■□□□□ 0.71
PTPRU-207ENST00000492954 GPC5P78333 572 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 IQCEQ6IPM2 695 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 PDZD4Q76G19 769 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-207ENST00000492954 EPM2AIP1Q7L775 607 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-207ENST00000492954 GPD1LQ8N335 351 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 C1orf127Q8N9H9 656 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 BORCS6Q96GS4 357 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 CHAMP1Q96JM3 812 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 ZNF512Q96ME7 567 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-207ENST00000492954 RTP3Q9BQQ7 232 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 PDE11AQ9HCR9 933 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 GDE1Q9NZC3 331 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 DSEQ9UL01 958 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 SCN1AP35498 2009 aa19.46■□□□□ 0.71
PTPRU-207ENST00000492954 ZNF197O14709 1029 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 EIF3DO15371 548 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPRU-207ENST00000492954 ITGB3P05106 788 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 AOC1P19801 751 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 AFMP43652 599 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 CDR1P51861 262 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 NUBP1P53384 320 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 EHHADHQ08426 723 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 SV2CQ496J9 727 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 WSCD1Q658N2 575 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 SCARA3Q6AZY7 606 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 CENPPQ6IPU0 288 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 UNC13DQ70J99 1090 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 METTL23Q86XA0 190 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 GRAMD1CQ8IYS0 662 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 TTC9BQ8N6N2 239 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 CACTINQ8WUQ7 758 aaKnown RBP19.45■□□□□ 0.7
PTPRU-207ENST00000492954 ZNF560Q96MR9 790 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 PHOX2BQ99453 314 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 ASAH2Q9NR71 780 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 ARHGEF3Q9NR81 526 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 AGAP1Q9UPQ3 857 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 SLC27A5Q9Y2P5 690 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 ZDHHC9Q9Y397 364 aa19.45■□□□□ 0.7
PTPRU-207ENST00000492954 KPNA7A9QM74 516 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 STK25O00506 426 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 MOSPD3O75425 235 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 SOAT2O75908 522 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 MYL4P12829 197 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 EPHA5P54756 1037 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 CUL4BQ13620 913 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 CYP4A22Q5TCH4 519 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 ALYREFQ86V81 257 aaKnown RBP19.44■□□□□ 0.7
PTPRU-207ENST00000492954 NELFCDQ8IXH7 590 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 ZNF507Q8TCN5 953 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 MTMR12Q9C0I1 747 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 ZCWPW1Q9H0M4 648 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 DNAJC25Q9H1X3 360 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 TBC1D17Q9HA65 648 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 FAM86C1Q9NVL1 165 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 HSPBP1Q9NZL4 362 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 TSC2P49815 1807 aa19.44■□□□□ 0.7
PTPRU-207ENST00000492954 H0Y858 1186 aa19.43■□□□□ 0.7
PTPRU-207ENST00000492954 KIAA0391O15091 583 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms