RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 PLS3P13797 630 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 PORP16435 677 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 RRM1P23921 792 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 PSMC2P35998 433 aaKnown RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 CASP4P49662 377 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 SLC12A3P55017 1021 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 PLCB3Q01970 1234 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 SPIDRQ14159 915 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 TRIP13Q15645 432 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 TBCCQ15814 346 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 RFX8Q6ZV50 586 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 KRT28Q7Z3Y7 464 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 FAM186BQ8IYM0 893 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 ZNF564Q8TBZ8 553 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 ALKBH8Q96BT7 664 aaKnown RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 MTBPQ96DY7 904 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 PWWP2AQ96N64 755 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 TMEM47Q9BQJ4 181 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 MKNK1Q9BUB5 465 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 MRPS26Q9BYN8 205 aaKnown RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 INTS2Q9H0H0 1204 aaKnown RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 KCNK13Q9HB14 408 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 FBXO6Q9NRD1 293 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 CHST7Q9NS84 486 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 LRRC4BQ9NT99 713 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 PCDHA12Q9UN75 941 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 NIP7Q9Y221 180 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCDC6-202ENST00000491922 SUGT1Q9Y2Z0 365 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 TMED5Q9Y3A6 229 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 NEU2Q9Y3R4 380 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 TELO2Q9Y4R8 837 aa6.79□□□□□ -1.32
CCDC6-202ENST00000491922 C15orf38-AP3S2A0A0A6YYH1 394 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CCDC160A6NGH7 325 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SPECC1L-ADORA2AF8WAN1 911 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 EDIL3O43854 480 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PEX1O43933 1283 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CSDE1O75534 798 aaKnown RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 USP1O94782 785 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 GOLGA8HP0CJ92 632 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 GZMAP12544 262 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ADRA1DP25100 572 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 IL6STP40189 918 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SLC1A1P43005 524 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 RAB15P59190 212 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 MSLNQ13421 630 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 NKX1-1Q15270 411 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 NFIL3Q16649 462 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SFT2D3Q587I9 215 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 MFSD4BQ5TF39 518 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CENPUQ71F23 418 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ARPINQ7Z6K5 226 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SFR1Q86XK3 245 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ZNF276Q8N554 614 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ZNF384Q8TF68 577 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 HAS1Q92839 578 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PRR11Q96HE9 360 aaPredicted RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ORAI2Q96SN7 254 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 NUP85Q9BW27 656 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 MAK16Q9BXY0 300 aaKnown RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 RBM38Q9H0Z9 239 aaKnown RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 C1orf21Q9H246 121 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SAYSD1Q9NPB0 183 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 DDX18Q9NVP1 670 aaKnown RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ARHGEF38Q9NXL2 777 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SPATA7Q9P0W8 599 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 UVRAGQ9P2Y5 699 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 FETUBQ9UGM5 382 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 SLC7A8Q9UHI5 535 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 MTMR7Q9Y216 660 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PCDHB13Q9Y5F0 798 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 LAMB2P55268 1798 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 POTEB3A0JP26 581 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 WDR91A4D1P6 747 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 USP17L3A6NCW0 530 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 USP17L4A6NCW7 530 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 E9PBE3 544 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CBFA2T3O75081 653 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PDE5AO76074 875 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PGM3O95394 542 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CYP1A2P05177 515 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ATP5BP06576 529 aaKnown RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 DLDP09622 509 aaKnown RBP6.78□□□□□ -1.32
CCDC6-202ENST00000491922 KRT4P19013 534 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 AQP4P55087 323 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 MTTPP55157 894 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ARL4CP56559 192 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PDE1BQ01064 536 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 GSTM4Q03013 218 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 CHRNDQ07001 517 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 ARHGAP44Q17R89 818 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 PCNX4Q63HM2 1172 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 GRAMD4Q6IC98 578 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 KLHL35Q6PF15 583 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 POTEBQ6S5H4 581 aa6.78□□□□□ -1.32
CCDC6-202ENST00000491922 TRIM67Q6ZTA4 783 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms