RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CCDC194A0A1B0GVG4 234 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 PHGDHO43175 533 aaKnown RBP4.88□□□□□ -1.63
VTA1-204ENST00000491881 AGFG2O95081 481 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 GJB1P08034 283 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 TRIM27P14373 513 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 SLC6A2P23975 617 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 PEX2P28328 305 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 SLC6A4P31645 630 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 APOBEC3AP31941 199 aaPredicted RBP4.88□□□□□ -1.63
VTA1-204ENST00000491881 PSMC1P62191 440 aaKnown RBP4.88□□□□□ -1.63
VTA1-204ENST00000491881 NOMO3P69849 1222 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 GALEQ14376 348 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 SAFBQ15424 915 aaKnown RBP eCLIP4.88□□□□□ -1.63
VTA1-204ENST00000491881 HTR3DQ70Z44 454 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 SYNE4Q8N205 404 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 FAM43AQ8N2R8 423 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 ZMAT3Q9HA38 289 aaKnown RBP4.88□□□□□ -1.63
VTA1-204ENST00000491881 RSAD1Q9HA92 442 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 PACSIN3Q9UKS6 424 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 ZDHHC8Q9ULC8 765 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 TPCN1Q9ULQ1 816 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 USP15Q9Y4E8 981 aaPredicted RBP4.88□□□□□ -1.63
VTA1-204ENST00000491881 PCDHGB6Q9Y5F9 930 aa4.88□□□□□ -1.63
VTA1-204ENST00000491881 ZNF785A8K8V0 405 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 LEFTY2O00292 366 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SCAF4O95104 1147 aaKnown RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 MATN4O95460 622 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 ANXA1P04083 346 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SPATA31D3P0C874 917 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 KITP10721 976 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 RARBP10826 455 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SLC7A1P30825 629 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SOX8P57073 446 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 EXOSC9Q06265 439 aaKnown RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 HABP2Q14520 560 aaPredicted RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 RABL3Q5HYI8 236 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SWSAP1Q6NVH7 229 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SPATA31D4Q6ZUB0 917 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 SYT12Q8IV01 421 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 VRK3Q8IV63 474 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 ZNF276Q8N554 614 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 PCSK9Q8NBP7 692 aaKnown RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 ZNF764Q96H86 408 aaPredicted RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 DCLRE1CQ96SD1 692 aaKnown RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 IMPG2Q9BZV3 1241 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 BHMT2Q9H2M3 363 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 DDX21Q9NR30 783 aaKnown RBP eCLIP4.87□□□□□ -1.63
VTA1-204ENST00000491881 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.87□□□□□ -1.63
VTA1-204ENST00000491881 SORCS3Q9UPU3 1222 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 ATP11BQ9Y2G3 1177 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 XDHP47989 1333 aa4.87□□□□□ -1.63
VTA1-204ENST00000491881 DIRC3C9JPN6 131 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 MASP2O00187 686 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 TRIM24O15164 1050 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 CKBP12277 381 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 ZNF135P52742 658 aaPredicted RBP4.86□□□□□ -1.63
VTA1-204ENST00000491881 RNASE9P60153 205 aaKnown RBP4.86□□□□□ -1.63
VTA1-204ENST00000491881 KIF22Q14807 665 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 POLD3Q15054 466 aaPredicted RBP4.86□□□□□ -1.63
VTA1-204ENST00000491881 PTPAQ15257 358 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 MAP9Q49MG5 647 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 LY6G5CQ5SRR4 150 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 EMC10Q5UCC4 262 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 TSHZ3Q63HK5 1081 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 CYB5RLQ6IPT4 315 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 APOA5Q6Q788 366 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 COL23A1Q86Y22 540 aaPredicted RBP4.86□□□□□ -1.63
VTA1-204ENST00000491881 RHOT2Q8IXI1 618 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 CELF5Q8N6W0 485 aaKnown RBP4.86□□□□□ -1.63
VTA1-204ENST00000491881 SLC17A8Q8NDX2 589 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 PJA1Q8NG27 643 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 CPT1CQ8TCG5 803 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 NUP133Q8WUM0 1156 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 LENG9Q96B70 501 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 C22orf23Q9BZE7 217 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 LRRC27Q9C0I9 530 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 SIK2Q9H0K1 926 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 RNPEPQ9H4A4 650 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 TRPM5Q9NZQ8 1165 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 SLC45A2Q9UMX9 530 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 CDYLQ9Y232 598 aa4.86□□□□□ -1.63
VTA1-204ENST00000491881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.86□□□□□ -1.63
VTA1-204ENST00000491881 FRS3O43559 492 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 PQBP1O60828 265 aaKnown RBP4.85□□□□□ -1.63
VTA1-204ENST00000491881 PRSS23O95084 383 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 ABHD16AO95870 558 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 CHEK2O96017 543 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 BRAFP15056 766 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 PHKG2P15735 406 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 NPR1P16066 1061 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 HDCP19113 662 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 GCSHP23434 173 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 PICALMQ13492 652 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 HDAC1Q13547 482 aaPredicted RBP4.85□□□□□ -1.63
VTA1-204ENST00000491881 SEMA5AQ13591 1074 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 NOMO2Q5JPE7 1267 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 FAM102AQ5T9C2 384 aaPredicted RBP4.85□□□□□ -1.63
VTA1-204ENST00000491881 AGAP9Q5VTM2 703 aa4.85□□□□□ -1.63
VTA1-204ENST00000491881 FOXR2Q6PJQ5 311 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms